Pairwise Alignments

Query, 869 a.a., DNA topoisomerase I from Pseudomonas putida KT2440

Subject, 873 a.a., DNA topoisomerase I from Pseudomonas simiae WCS417

 Score = 1621 bits (4197), Expect = 0.0
 Identities = 799/870 (91%), Positives = 831/870 (95%), Gaps = 1/870 (0%)

Query: 1   MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAA-GE 59
           MGKSLVIVESPAKAKTINKYLGN+YVVKSSIGHIRDLPTSGSASASKEPAAKRGKAA GE
Sbjct: 1   MGKSLVIVESPAKAKTINKYLGNEYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAAGE 60

Query: 60  APALSPKEKARRQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD 119
            P L+PKEKAR+QLV+RMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD
Sbjct: 61  GPVLTPKEKARKQLVSRMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLD 120

Query: 120 REGEAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDR 179
           REGEAIAWHLREAIGGDD+RYKRVVFNEITKKAIQEAFS+PGELDIDRVNAQQARRFLDR
Sbjct: 121 REGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIQEAFSKPGELDIDRVNAQQARRFLDR 180

Query: 180 VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEIHADLGTAKNAK 239
           VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWE+HADLGTAK A 
Sbjct: 181 VVGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEVHADLGTAKGAN 240

Query: 240 VRFEVAREKGEAFKPLNEAQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAA 299
           VRFEVAREKGEAFKPLNEAQAMAALEKLK+SSYS+VKRED+PTSSKPSAPFITSTLQQAA
Sbjct: 241 VRFEVAREKGEAFKPLNEAQAMAALEKLKSSSYSIVKREDKPTSSKPSAPFITSTLQQAA 300

Query: 300 SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALDMARSYIEREFGKQYLPEAPL 359
           SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLS DA+ MAR+YIE EFGK+YLPE P 
Sbjct: 301 SNRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSVDAVAMARTYIEEEFGKKYLPEKPN 360

Query: 360 VYGSKEGAQEAHEAIRPSDVNTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSV 419
           VY SKEGAQEAHEAIRPSD NT P KLSGMERDAERLYELIWRQFLACQM PAQYLST+V
Sbjct: 361 VYSSKEGAQEAHEAIRPSDANTTPAKLSGMERDAERLYELIWRQFLACQMLPAQYLSTTV 420

Query: 420 TVAAGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLIQIDPSQHFTKP 479
           TVAA DFELRAKGRILKFDGYTRV+PQ +KPG+DDVLP+M QG+ LKLI +DPSQHFTKP
Sbjct: 421 TVAASDFELRAKGRILKFDGYTRVMPQIAKPGDDDVLPDMAQGDTLKLITLDPSQHFTKP 480

Query: 480 PARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSES 539
           PAR++EASLVKEMEKRGIGRPSTYAAIISTIQDRGYV LHNRRFYSEKMGDIVTERLSES
Sbjct: 481 PARYSEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVALHNRRFYSEKMGDIVTERLSES 540

Query: 540 FSNLMDYGFTADMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESSEDGMRANQPTMT 599
           FSNLMDYGFTA MEENLDDVAQGERDWKNVLDEFYGDF KKL+ AES E GMRANQP MT
Sbjct: 541 FSNLMDYGFTAGMEENLDDVAQGERDWKNVLDEFYGDFKKKLEVAESPESGMRANQPVMT 600

Query: 600 NIPCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESRVL 659
           +IPC+ CGRPM IRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESES VL
Sbjct: 601 DIPCQTCGRPMQIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESLVL 660

Query: 660 LGKHRCPICATAMDAYLLDEKHKLHICGNNPDCVGYEIEEGNYRIKGYEGPSLECDKCGS 719
            GKHRCPIC+TAMDAYLLDEKHKLHICGNNPDC GYEIEEG YRIKGYEGPSLECDKCGS
Sbjct: 661 RGKHRCPICSTAMDAYLLDEKHKLHICGNNPDCNGYEIEEGTYRIKGYEGPSLECDKCGS 720

Query: 720 EMQLKTGRFGKFFGCTNPACKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGA 779
           EMQLKTGRFGKFFGCTNP CKNTRKLLKSG+AAPPKMD V MPELKCEKV+DTY+LRDGA
Sbjct: 721 EMQLKTGRFGKFFGCTNPTCKNTRKLLKSGDAAPPKMDPVKMPELKCEKVNDTYILRDGA 780

Query: 780 SGLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPDGRPAVIRYSRKTK 839
           SGLFLAASQFPKNRETRAPLVLEIVPHK EIDPKYHFLC+AP+KDPDGRPAVIRYSRKTK
Sbjct: 781 SGLFLAASQFPKNRETRAPLVLEIVPHKDEIDPKYHFLCEAPKKDPDGRPAVIRYSRKTK 840

Query: 840 EQYVQSEVDGKPTGWKAFYDGNAWKVEDKR 869
           EQYVQ+EVDGKPTGWKAFYDG  WKVEDKR
Sbjct: 841 EQYVQTEVDGKPTGWKAFYDGGKWKVEDKR 870