Pairwise Alignments

Query, 869 a.a., DNA topoisomerase I from Pseudomonas putida KT2440

Subject, 880 a.a., DNA topoisomerase 1 from Acinetobacter radioresistens SK82

 Score = 1123 bits (2905), Expect = 0.0
 Identities = 558/865 (64%), Positives = 682/865 (78%), Gaps = 14/865 (1%)

Query: 3   KSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAGEAPA 62
           ++LVIVESPAKAKTINKYLG+QY+VKSS+GH+RDLPT GSA  + +  A R K      A
Sbjct: 23  RALVIVESPAKAKTINKYLGSQYIVKSSVGHVRDLPTGGSAKNTDKKPAARTKLTEADKA 82

Query: 63  LSPKEKARRQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLDREG 122
               +KA++ L+ RMGVDP+HGW+A YE+LPGKE V+ EL++LA   D IYLATDLDREG
Sbjct: 83  ----KKAQQALINRMGVDPEHGWEAHYEVLPGKENVVSELKKLASQVDEIYLATDLDREG 138

Query: 123 EAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDRVVG 182
           EAIAWHL+E IGGDD+RY+RVVFNEITK AIQEAF QPG LD ++V+AQQARRFLDRVVG
Sbjct: 139 EAIAWHLKEVIGGDDSRYQRVVFNEITKNAIQEAFKQPGRLDTNKVHAQQARRFLDRVVG 198

Query: 183 YMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEIHADLGTAKNAKVRF 242
           +M+SPLLW KIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYW++ AD   +K  ++R 
Sbjct: 199 FMISPLLWEKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWQVFADT-LSKKDQIRL 257

Query: 243 EVAREKGEAFKPLNEAQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAASNR 302
           E  ++ G+  K  N+AQ    LE LK S ++V +RED+PT   PSAP+ITSTLQQAAS R
Sbjct: 258 EAVKQAGKTLKLKNKAQTDTLLEVLKKSEFTVAQREDKPTKVNPSAPYITSTLQQAASTR 317

Query: 303 LGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALDMARSYIEREFGKQYLPEAPLVYG 362
           LGF VKKTMM+AQRLYE G+ITYMRTDST LS DA+ M R++IE E+G +YLP  P  YG
Sbjct: 318 LGFSVKKTMMLAQRLYEGGFITYMRTDSTFLSDDAIKMVRNHIESEYGDKYLPAKPNRYG 377

Query: 363 SKEGAQEAHEAIRPSDVNTHPTKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSVTVA 422
           SK GAQEAHEAIRPS V     +L+G+ERDA+RLY+LIWRQF+ACQM PA+YLS+++TVA
Sbjct: 378 SKAGAQEAHEAIRPSSVELKGDQLAGVERDAQRLYDLIWRQFVACQMTPAEYLSSTLTVA 437

Query: 423 AGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLIQIDPSQHFTKPPAR 482
           A D EL+AKGRIL FDG+T++    +K  +D +LP +  GE LKL ++DPSQHFTKPPAR
Sbjct: 438 ASDVELKAKGRILVFDGFTKIRGA-NKSDDDVLLPAVKVGEVLKLEKLDPSQHFTKPPAR 496

Query: 483 FTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESFSN 542
           FTEASLVKE+EKRGIGRPSTYAAIISTIQDRGYV L NRR Y+EKMG+IVT+RL ESF+N
Sbjct: 497 FTEASLVKELEKRGIGRPSTYAAIISTIQDRGYVKLENRRLYAEKMGEIVTDRLDESFNN 556

Query: 543 LMDYGFTADMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESSEDGMRANQPT-MTNI 601
           LM+Y FTAD+E  LD VA GER+WK +LD FYGDF ++L  A+  + GMR NQP  + ++
Sbjct: 557 LMNYAFTADLEGQLDKVATGERNWKELLDSFYGDFKQRLNNAQ-GDQGMRRNQPVEVPDV 615

Query: 602 PCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAA--DDEGESESRVL 659
            C EC RPM IRT +TGVFLGCSGY+LPPKERCK T+NLVP + +AA  DD+G +E+  L
Sbjct: 616 HCPECDRPMQIRTGTTGVFLGCSGYNLPPKERCKGTLNLVPVESLAALSDDDG-AETADL 674

Query: 660 LGKHRCPICATAMDAYLLDEKHKLHICGNNPDCVGYEIEEGNYRIKGYEGPSLECDKCGS 719
           + K RC IC TAMD+Y++D   KLHICGNNPDC GYE+EEG ++IKGY+GP++ CDKC  
Sbjct: 675 MSKKRCLICGTAMDSYVIDGGRKLHICGNNPDCDGYEVEEGEFKIKGYDGPTIPCDKCDG 734

Query: 720 EMQLKTGRFGKFFGCTNPACKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGA 779
           EMQLKTGRFG +F C N  C NTRK+LK+G+ APP++D + M  L+  K DD +VLRDGA
Sbjct: 735 EMQLKTGRFGPYFACNN--CDNTRKVLKNGQPAPPRVDPIKMEHLRSTKHDDYFVLRDGA 792

Query: 780 SGLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPDGRPAVIRYSRKTK 839
           +GLFLAAS+FPK RETRAP V E+     ++DPKY FL  AP  DP+G P V+++SRK +
Sbjct: 793 AGLFLAASKFPKIRETRAPKVAELRTVAGQLDPKYQFLLQAPDTDPEGNPTVVKFSRKNQ 852

Query: 840 EQYVQSEV-DGKPTGWKAFYDGNAW 863
           +QY+ SE  +GK T W   +    W
Sbjct: 853 QQYIGSETPEGKQTKWSLVFQSGKW 877