Pairwise Alignments

Query, 391 a.a., beta-ketoadipyl CoA thiolase, beta component from Pseudomonas putida KT2440

Subject, 398 a.a., 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) from Variovorax sp. SCN45

 Score =  278 bits (712), Expect = 1e-79
 Identities = 171/401 (42%), Positives = 227/401 (56%), Gaps = 22/401 (5%)

Query: 6   RDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNGKVDPKEVEDVIWGCVNQT 65
           +D  IV   RTP+G+S  G  RN R +D+ A  +   L     +DPK +ED+I GC    
Sbjct: 5   QDAYIVSATRTPIGKSHRGYFRNYRPDDLLATTLRAALAAVPSLDPKAIEDIICGCAIPE 64

Query: 66  LEQGWNIARMASLMTPIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM 125
            +QG N+AR+ +++  +P +    TV+R C S +SA+  AA  I  G  DV +  GVE M
Sbjct: 65  SQQGLNVARIGAVLAGLPTSVGGITVNRFCASGLSAVQMAADRIRVGEADVMIAAGVESM 124

Query: 126 GHVSMMHGVDPNPHLSLHAAKASG------MMGLTAEMLGKMHGITREQQDLFGLRSHQL 179
             V MM     +P LS    +  G       MGLTAE + +   ++RE QD F L SHQ 
Sbjct: 125 SMVPMMGN---SPSLSPSIFEREGDVGIAYGMGLTAEKVAQQWKVSREAQDEFALASHQK 181

Query: 180 AHKATVEGKFKDEIIPMQGYDENGFL---------KVFDFDETIRPETTLEGLASLKPAF 230
           A  A   GKF DEI P++  D    L         +  + DE  RP+T+LEGLA L+  F
Sbjct: 182 ALAAQKAGKFADEITPIEVTDRTPNLETGESIAKTRTVNLDEGARPDTSLEGLAKLRTVF 241

Query: 231 NPKGGTVTAGTSSQITDGASCMIVMSGQRAMDLGIQPLAVIRSMAVAGVDPAIMGYGPVP 290
             + GTVTAG SSQ +DGA  +I+ S +     G+ PLA   S A  GV P IMG GP+ 
Sbjct: 242 AAR-GTVTAGNSSQTSDGAGALILASEKAVKQYGLTPLARFVSFASKGVPPHIMGIGPIE 300

Query: 291 STQKALKRAGLTMADIDFIELNEAFAAQALPVLKDLKVLDKMDEKVNLHGGAIALGHPFG 350
           +   AL+ AGL   DID+ ELNEAFAAQ+L V+  L  LD    KVN  GGAIALGHP G
Sbjct: 301 AIPAALRYAGLKHEDIDWFELNEAFAAQSLAVINTLG-LD--PSKVNPMGGAIALGHPLG 357

Query: 351 CSGARISGTLLNVMKQNGGTLGVATMCVGLGQGITTVFERV 391
            +GA  S T+++ +++     G+ TMCVG+GQG   +FERV
Sbjct: 358 ATGAIRSATVVHALRRENLKYGMVTMCVGMGQGAAGIFERV 398