Pairwise Alignments

Query, 642 a.a., DNA-binding ATPase involved in replication from Pseudomonas putida KT2440

Subject, 609 a.a., ABC transporter ATP-binding protein uup from Xanthobacter sp. DMC5

 Score =  417 bits (1073), Expect = e-121
 Identities = 247/645 (38%), Positives = 356/645 (55%), Gaps = 54/645 (8%)

Query: 3   LLKFSDVSLAFGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMLRLVKGEQKGDDGEIWR 62
           L+   D+ L FGA PLLD     ++ GERVC++GRNG+GKS++L++  G  + D G  + 
Sbjct: 5   LVLLQDIHLRFGATPLLDGAELSVSAGERVCLVGRNGSGKSTLLKVAAGLVEPDSGTRFF 64

Query: 63  APGLKIGELPQELPVADERTVFDVVAAGLDGVGELLAQFHHLSMNIQGDEDLEKLMHVQH 122
            PG  +  L QE   +   T    V AGL G G+                          
Sbjct: 65  QPGTTVRYLQQEPDFSGYATTLAYVEAGL-GPGD-------------------------- 97

Query: 123 ELEARDGWRLQQVVESTLSRLQLPADKTLAELSGGWRRRVLLAQALVSEPDLLLLDEPTN 182
                D +R Q +    L+ L L   +  A LSGG  RR  LA+ +  EPD+LLLDEPTN
Sbjct: 98  -----DAYRAQYL----LTELGLTGQEDPAHLSGGEARRAALARVIAPEPDVLLLDEPTN 148

Query: 183 HLDIGAIAWLEEALRGFNGAVLFITHDRSFLQNLATRILELDRGGLIDWNGDYASFLVHK 242
           HLD+ AI WLE  L+G   A++ I+HDR FL+ L+   + LDRG        + +F   +
Sbjct: 149 HLDLPAIEWLESELKGLKSAMVLISHDRRFLETLSRATVWLDRGQTRRLEQGFGAFEAWR 208

Query: 243 EAALAAEETANALFDKRLAQEEVWIRQGIKARRTRNEGRVRALKALRVERGERRERQGKA 302
           +  L  EET     D+++  E  W+R G+ ARR RN  R+  L ++R +R + R   G  
Sbjct: 209 DEVLEQEETERHKLDRKIVAELDWLRYGVTARRKRNVRRLGLLHSMRKDRRDERRAVGNV 268

Query: 303 NIQIEAADKSGKQVMVLENVSFHHADGPLLVKDFSMVLQRQDRIGLLGANGTGKTTLLKM 362
            + +  A+ SGK V+  ++++    +  + VKDFS  + R DRIG++G NG GKTTL+K+
Sbjct: 269 KLAVSEAEASGKLVIEAKHIAKAFGEREV-VKDFSTRILRGDRIGIIGPNGAGKTTLIKL 327

Query: 363 MLGDLEPTAGKVERGTKLEVAYFDQMRHQLDLEKTVIDNLAEG-RDFIEIDGQNRHVLSY 421
           + G+L P +G V+ GT LEVA  DQ R  LD   T+ D L  G  D +++ G  +HV+ Y
Sbjct: 328 LTGELAPDSGTVKLGTNLEVASLDQKRAALDPGTTLRDALTGGGSDQVQVGGAPKHVMGY 387

Query: 422 LGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELLEEVL 481
           L DFLF+P++A  P+  LSGGER RL+LA+  + P+N+LVLDEPTNDLD+ETL+LL+E++
Sbjct: 388 LKDFLFTPEQANAPLSVLSGGERGRLMLARALALPSNVLVLDEPTNDLDLETLDLLQEMV 447

Query: 482 SNYKGTVLMVSHDRAFLDNVVTSTLVFEGEGKVREYVGGYEDWIRQGG-----SPKLLGV 536
           ++Y GTV++VSHDR FLD  V+S ++ EG+G  REY GGY D + Q G       K    
Sbjct: 448 ADYPGTVILVSHDRDFLDRTVSSVIMAEGDGVFREYAGGYSDMLSQRGRGVEARDKSAPA 507

Query: 537 TESKGGKSALNSAVVEKVEAKPEPVAAPVVEDASKKKLSYKLQRELEMLPGQIDELEQRM 596
            ++KGG+        +K +A      A       K++LS+  Q  L+ LP  +D+L   +
Sbjct: 508 AKAKGGE--------QKPDAGKGTGGAAA---GGKRRLSFHEQHALKTLPKTMDDLRANL 556

Query: 597 AEAQEEVNAAGFYQRPIAETSAVLARIEKLQGELDVLVERWAELE 641
            +   E+     Y R  A      A + + Q  LD   E W  LE
Sbjct: 557 EKLAAEIADPALYARDPARFDKASAALAETQAALDAAEEEWLRLE 601