Pairwise Alignments

Query, 642 a.a., DNA-binding ATPase involved in replication from Pseudomonas putida KT2440

Subject, 608 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  412 bits (1060), Expect = e-119
 Identities = 244/645 (37%), Positives = 369/645 (57%), Gaps = 55/645 (8%)

Query: 3   LLKFSDVSLAFGAMPLLDKVSWQIARGERVCIIGRNGTGKSSMLRLVKGEQKGDDGEIWR 62
           +LK  D+ L FG  PLLD  + Q+  G+R+C++GRNG+GKS+++++  G  +   GE++R
Sbjct: 5   ILKLDDIKLTFGVTPLLDGANLQVEPGDRICLVGRNGSGKSTLMKIAAGLVEAQSGEVFR 64

Query: 63  APGLKIGELPQELPVADERTVFDVVAAGLDGVGELLAQFHHLSMNIQGDEDLEKLMHVQH 122
            P   I  L Q    A   TV     AGL G G+                          
Sbjct: 65  HPAATIRYLEQAPDFAGYATVQAYAEAGL-GPGD-------------------------- 97

Query: 123 ELEARDGWRLQQVVESTLSRLQLPADKTLAELSGGWRRRVLLAQALVSEPDLLLLDEPTN 182
                D +R+  ++E     L L   +    LSGG  RRV LA+ +  EPD+L+LDEPTN
Sbjct: 98  -----DPYRVTYLLE----HLGLTGQENPESLSGGEARRVALARVMAPEPDILMLDEPTN 148

Query: 183 HLDIGAIAWLEEALRGFNGAVLFITHDRSFLQNLATRILELDRGGLIDWNGDYASFLVHK 242
           HLD+  I WLE  L+    A++ I+HDR FL+ ++T  + LDRG     N  +A F   +
Sbjct: 149 HLDLPTIEWLEGELQQTRSALVLISHDRRFLEKVSTSTVWLDRGQSRRLNRGFAHFEEWR 208

Query: 243 EAALAAEETANALFDKRLAQEEVWIRQGIKARRTRNEGRVRALKALRVERGERRERQGKA 302
           +  L  EE       K + +EE W+R G+ ARR RN  RV  L+A+R +    +  QG  
Sbjct: 209 DKVLEEEELEQHKLGKAIEREEHWMRYGVTARRKRNMRRVGELQAMRADYRGHKGPQGSV 268

Query: 303 NIQIEAADKSGKQVMVLENVSFHHADGPLLVKDFSMVLQRQDRIGLLGANGTGKTTLLKM 362
              +    +SGK V+  + +S  + +  ++V  FS+ + R D IGL+G NG GKTTLLKM
Sbjct: 269 QATVTEGRESGKLVIEADAISKAYGER-VIVAPFSLRVHRGDCIGLVGPNGAGKTTLLKM 327

Query: 363 MLGDLEPTAGKVERGTKLEVAYFDQMRHQLDLEKTVIDNLAEGR-DFIEIDGQNRHVLSY 421
           + G+LEP +G V+ GT LE+A  DQ R  L+  +T+   L +GR D + ++G+ +HV  Y
Sbjct: 328 LTGELEPDSGTVKLGTNLEIATLDQKREDLNPNETLAHYLTDGRGDNLLVNGEVKHVTGY 387

Query: 422 LGDFLFSPQRARTPVKALSGGERARLLLAKLFSKPANLLVLDEPTNDLDVETLELLEEVL 481
           + DFLF P++ARTP++ LSGGERARL+LA++ ++P NLL+LDEPTNDLD+ETL+LL+E++
Sbjct: 388 MKDFLFQPEQARTPIRNLSGGERARLILARILARPTNLLILDEPTNDLDIETLDLLQEIV 447

Query: 482 SNYKGTVLMVSHDRAFLDNVVTSTLV----FEGEGKVREYVGGYEDWIRQGGSPKLLGVT 537
           + + GTV++VSHDR FLD  VTST+      + +G+  EY GGY D + Q          
Sbjct: 448 AGFSGTVILVSHDRDFLDRTVTSTIAPANPDQPDGRWIEYAGGYSDMMAQ---------- 497

Query: 538 ESKGGKSALNSAVVEKVEAKPEPVAAPVVEDA-SKKKLSYKLQRELEMLPGQIDELEQRM 596
             KG       A  ++ +AK    A+P  E A +K KLS+K +  LE LP ++++ ++ +
Sbjct: 498 -RKGAADEKRKAERQE-KAKAVSSASPSQEPAKAKGKLSFKQKFALENLPKEMEKTQEEI 555

Query: 597 AEAQEEVNAAGFYQRPIAETSAVLARIEKLQGELDVLVERWAELE 641
           A+ ++ +     + +  A  + +   +EKL+ +L+ + E W ELE
Sbjct: 556 AKREQRMADPQLFAKDQATFNKLAQEMEKLREKLETMEEEWLELE 600