Pairwise Alignments

Query, 311 a.a., putative CheV-like chemotaxis protein from Pseudomonas putida KT2440

Subject, 1186 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 65.5 bits (158), Expect = 6e-15
 Identities = 43/122 (35%), Positives = 59/122 (48%), Gaps = 8/122 (6%)

Query: 169  ADPVLARARGREVLLVDDSSVALAQLRDTLSQLGMKLHVASDGLKALRMLKGWADAGEDV 228
            A+PV A   GR  LLVDD       L   L   G+K+ +A DG KAL  L+  AD     
Sbjct: 1049 AEPVDAILAGRTALLVDDDMRNAFALSKVLRARGLKVLIAQDGAKALSQLQSRADVD--- 1105

Query: 229  CEKLLMVFTDAEMPEMDGYRLTTEIRSDARLRQLYVVLHTSLSGSFNESMVKKVGCDNFL 288
                 +V  D  MP MDGY+   EIR D R   L ++  T+ + + +       G D++L
Sbjct: 1106 -----LVLMDIMMPGMDGYQTMGEIRKDPRFAHLPIIALTAKAMAGDRDRCLAAGADDYL 1160

Query: 289  SK 290
            +K
Sbjct: 1161 TK 1162



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 8/71 (11%)

Query: 172 VLARARG----REVLLVDDSSVALAQLRDTLSQLGMKLHVASDGLKALRMLKGWADAGED 227
           VL RAR     R +LLVD    + A + +TL  L + + VA  G  AL  L     AG  
Sbjct: 903 VLLRARRADGRRRLLLVDGDEASRATIGETLVGLDLDITVAETGQVALEHLA----AGPF 958

Query: 228 VCEKLLMVFTD 238
            C  L +  +D
Sbjct: 959 DCMVLDLALSD 969



 Score = 26.6 bits (57), Expect = 0.003
 Identities = 18/90 (20%), Positives = 36/90 (40%), Gaps = 9/90 (10%)

Query: 175 RARGREVLLVDDSSVALAQLRDTLSQLGMKLHVASDGLKALRMLKGWADAGEDVCEKLLM 234
           +A G+ +L+++D  +    + D     G     A DG   L + +    +G         
Sbjct: 787 KAEGKLLLVIEDDPIFRRVVCDMAQAKGFATATAGDGKTGLELARLRRPSG--------- 837

Query: 235 VFTDAEMPEMDGYRLTTEIRSDARLRQLYV 264
           V  D  +P+M G+ +   ++     R + V
Sbjct: 838 VVLDIGLPDMSGWEVIEALKLQPETRDIPV 867