Pairwise Alignments

Query, 219 a.a., DNA-binding response regulator, LuxR family from Pseudomonas putida KT2440

Subject, 209 a.a., transcriptional regulator from Pseudomonas simiae WCS417

 Score =  135 bits (341), Expect = 4e-37
 Identities = 74/213 (34%), Positives = 127/213 (59%), Gaps = 7/213 (3%)

Query: 4   RLLLVDDHSLIRAGVRALVCDIPGYDVVGEADDGNQLLDQVRTLAPDIILLDISMRSTSG 63
           R+L+ +DH+++R G++ L+       VVGEA +G QLL+ +R +  +++LLDISM   +G
Sbjct: 3   RVLVAEDHTIVREGIKQLIGLAKDLLVVGEASNGEQLLEALRHVPCEVVLLDISMPGVNG 62

Query: 64  LDALTQLRASGSTCKVLILSMHTDPDLIMRALESGAHGYLLKDTSATELEQALGAVRHGE 123
           L+A+ ++RA  +   +L+LSMH +  +  RAL+ GA GY  KD+    L  A+  V  G 
Sbjct: 63  LEAIARIRALNNPPAILVLSMHDEAQMAARALKVGAAGYATKDSDPALLLTAIRKVAAGG 122

Query: 124 RYLSPAIAHTVINQALRHTKQGKPSAGERHNLTS-RQLEILRLIVRGKSTREIAAGLGLS 182
           RY+ P +A  ++ +       G   A   H+L S R+  +   + +G +  +IA  L LS
Sbjct: 123 RYIDPDLADRMVFEV------GLTDARPLHSLLSEREFSVFERLAQGANVNDIAQQLALS 176

Query: 183 IKTVETHRSQIMKRLQIHDVAGLVLFAVREKII 215
            KT+ TH++++M++L I  +A LV +A+  K++
Sbjct: 177 SKTISTHKARLMQKLNITSLAELVKYAMEHKLL 209