Pairwise Alignments

Query, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  271 bits (692), Expect = 6e-77
 Identities = 182/545 (33%), Positives = 300/545 (55%), Gaps = 17/545 (3%)

Query: 18  MLRKSLRVQILSLLGGSVLAMLLIALVCFQFLS-SSVRGYAE-LVDGPLRASQLIDE-AN 74
           M  +++ +   + LG + +  L++ L  F     S +RG  E +    + + + +DE   
Sbjct: 1   MSLRNMNIAPRAFLGFAFIGALMLFLGVFALNQMSKIRGATEDITMSSVPSIRALDEFTQ 60

Query: 75  LQFKIQVQEWKNVLLRGRQPAEMDKYWQQFQAREQQVQQLLG---QLIDNSDARLKASLQ 131
           L  +++V  ++  LL  R+P    K  + F+ R QQ++   G   +LI++S+ R      
Sbjct: 61  LTLRLRVLSYR--LLTNREPEVQQKTLEAFEVRNQQIRTAQGIYEKLIESSEERAAYD-- 116

Query: 132 QLRDSHRQLGQAYAQGRQAFLAAGGDPVAGDRAVKGVDRAA-SEQMSELVEQLRADARQR 190
              D  R LGQ +    +    +  + V   R++   +  + SEQ++ ++ +L     + 
Sbjct: 117 ---DYVRLLGQYHQIEERMKSLSRANQVEELRSLLNNELLSNSEQVNAVLTRLLDINNKM 173

Query: 191 AASINASAERTVWLG---LLVMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSF 247
           A + N  AE    +    ++ +L  A L+ LL  WL+ RS+  PI Q +E   ++++G+ 
Sbjct: 174 ALATNKDAEDQYNMAFNMVVSLLVIATLLTLLFAWLLTRSITLPIAQALEAAEEVAEGNL 233

Query: 248 AARVDSRREDELGRLARAANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHD 307
              +     DE GRL  A   ++D L DT+ R+  +A +L  A+ +L ++  + ARG   
Sbjct: 234 TRPIKVDGSDEAGRLLAAMAKMQDKLRDTLQRIAGSATQLASAAEELNAVTDESARGLTQ 293

Query: 308 QFQRTDQVATAMHEMSATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNRE 367
           Q    +Q ATA++EM++  +EVAR+A   + A+ +A  SA  G  ++Q+T+  I  ++ +
Sbjct: 294 QNNEIEQAATAVNEMTSAVEEVARNAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGD 353

Query: 368 IAGTATVIRDLEHDSTRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEV 427
           +  TAT+I DL ++S  IGKVL+VIRG+A+QTNLLALNAAIEAARAGEAGRGFAVVADEV
Sbjct: 354 VQATATLIGDLANESRDIGKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEV 413

Query: 428 RSLAQRTAASIAEIHQIIEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAV 487
           R+LA RT  S +EI ++I ++Q+G   AV ++ +  +R++      + AG  L  I  A+
Sbjct: 414 RALAHRTQQSTSEIERMIGSIQAGTEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAI 473

Query: 488 EAIRDMNRQIATAAEEQTSVAEDISRNLIEITRIATANQEAVQHTEQAGQRLHGLSGQLG 547
             I + N  IA+AAEEQ  VA ++ RNL+ I  ++  +      T  A   L  L+  L 
Sbjct: 474 VEINERNLVIASAAEEQAQVAREVDRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLN 533

Query: 548 EVTSR 552
            +  R
Sbjct: 534 GMVGR 538