Pairwise Alignments

Query, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

Subject, 521 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  219 bits (559), Expect = 2e-61
 Identities = 133/335 (39%), Positives = 192/335 (57%), Gaps = 4/335 (1%)

Query: 205 GLLVMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSFAARVDSRREDELGRLAR 264
           G  +    +V +GLL L    R L    ++L+    Q +     A++ +       RL  
Sbjct: 175 GFALAAGLSVPLGLLGLSWQQRGL----KRLLRLAEQTTSDPLIAQMYTDSRGAQARLEM 230

Query: 265 AANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVATAMHEMSA 324
           +  +    L   + RLQD A+ L   + Q  ++A + + G   Q   T+QVATA+++M+A
Sbjct: 231 SILSQEARLKTCLTRLQDTAEHLNDQAAQSNTLAHNSSSGLERQRVETEQVATAVNQMAA 290

Query: 325 TAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTR 384
           T QEVA H    A A  +A+     G  +  +T + I  ++  +  T   +  L  DS  
Sbjct: 291 TTQEVASHVQRTADATQEANRLTGRGRDIAGETREAIQRLSVAVGETGVTVTQLAKDSDE 350

Query: 385 IGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQI 444
           IG V++VI+GIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRTA S  +IH +
Sbjct: 351 IGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHAL 410

Query: 445 IEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAEEQ 504
           I  +Q  A  AV+ +++G ++++EG  +V +A Q L  I++AV  I DM  QIA A EEQ
Sbjct: 411 IAKLQQTAAAAVQTMDAGHRQAEEGVARVMEADQALVGISEAVAHITDMTTQIAAATEEQ 470

Query: 505 TSVAEDISRNLIEITRIATANQEAVQHTEQAGQRL 539
           +SVAE+ISRN+  I  +A    E   ++ Q  + L
Sbjct: 471 SSVAEEISRNISTIALLADQTSEQAMNSAQLSEEL 505



 Score = 42.0 bits (97), Expect = 6e-08
 Identities = 73/364 (20%), Positives = 135/364 (37%), Gaps = 58/364 (15%)

Query: 88  LLRGRQPAEMDKYWQQFQAREQQVQQLLGQLIDNSDARLKASLQQLRDSHRQLGQAYAQG 147
           LLR  +    D    Q     +  Q  L   I + +ARLK  L +L+D+   L    AQ 
Sbjct: 201 LLRLAEQTTSDPLIAQMYTDSRGAQARLEMSILSQEARLKTCLTRLQDTAEHLNDQAAQS 260

Query: 148 RQAFLAAGGDPVAGDRAVKGVD--RAASEQMSELVEQLRADARQRAASINASAERTVWLG 205
                           +  G++  R  +EQ++  V Q+ A  ++ A+ +  +A+ T    
Sbjct: 261 N----------TLAHNSSSGLERQRVETEQVATAVNQMAATTQEVASHVQRTADATQEAN 310

Query: 206 LLVMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSFAARVD--SRREDELGRLA 263
            L                  R +    R+ I+ ++ ++ G     V   ++  DE+G + 
Sbjct: 311 RLTGR--------------GRDIAGETREAIQRLS-VAVGETGVTVTQLAKDSDEIGGVV 355

Query: 264 RAANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARG-------THDQFQRTDQVA 316
                + D         Q N   L  A    R  AG+M RG            QRT +  
Sbjct: 356 DVIKGIAD---------QTNLLALNAAIEAAR--AGEMGRGFAVVADEVRQLAQRTAEST 404

Query: 317 TAMHEMSATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIR 376
             +H + A  Q+ A  A +          +  AG +  ++ +  +   ++ + G +  + 
Sbjct: 405 GQIHALIAKLQQTAAAAVQ----------TMDAGHRQAEEGVARVMEADQALVGISEAVA 454

Query: 377 DLEHDSTRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAA 436
            +   +T+I    E    +AE+ +      A+ A +  E     A +++E+   A  T  
Sbjct: 455 HITDMTTQIAAATEEQSSVAEEISRNISTIALLADQTSEQAMNSAQLSEELTHTA-NTQY 513

Query: 437 SIAE 440
           S+ E
Sbjct: 514 SLVE 517