Pairwise Alignments

Query, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

Subject, 638 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  261 bits (667), Expect = 6e-74
 Identities = 177/522 (33%), Positives = 279/522 (53%), Gaps = 20/522 (3%)

Query: 49  LSSSVRGYAELVDGPLRA----SQLIDEANLQFKIQVQEWKNVLLRG------RQPAEMD 98
           LS   + +A +V   L+     S+L D A+     +V E +  LL+G          ++ 
Sbjct: 116 LSQYKKAFATMVQAGLKREGARSKLGDTAD-NAVAKVSEVEKSLLQGDSVTQFNSVVDLS 174

Query: 99  KYWQQ--FQAR------EQQVQQLLGQLIDNSDARLKASLQQLRDSHRQLGQAYAQGRQA 150
           K  QQ  FQ R      + + +Q     IDN+  ++     QL   ++   +  +   QA
Sbjct: 175 KLIQQARFQVRGYTYSAKVEAEQPALDAIDNAVKKITELQGQLPAQYQANLEEASTSLQA 234

Query: 151 FLAAGGDPVAGDRAVKGVDRAASEQMSELVEQLRADARQRAASINASAERTVWLGLLVML 210
           + AA         A     +  S Q   L+         +    +A A     L LL+  
Sbjct: 235 YRAAVSQYRDSQTAAAAALKIMSAQGDTLLGHSDKLTLSQTVVRDADAAHAKQL-LLLAT 293

Query: 211 ASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSFAARVDSRREDELGRLARAANTLR 270
             A++ GL++ W + R ++ P+ Q ++   +++ G  +  + S R+DELG+L RA  ++ 
Sbjct: 294 VLALIFGLVAAWAITRQIVIPLNQTLQVAQRVASGDLSHNLTSMRQDELGQLQRAMQSMT 353

Query: 271 DFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVATAMHEMSATAQEVA 330
             L + +G + D   ++  A+ QL ++    + G + Q   TDQVATAM+EM+AT QEVA
Sbjct: 354 VGLRELIGGISDGVTQIASAAEQLSAVTEQTSAGVNSQKVETDQVATAMNEMAATVQEVA 413

Query: 331 RHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTRIGKVLE 390
           R+A EA+ AA  AD  A+ G++V+ + I  I  +  E+  +   + DL+ +S +IG VL+
Sbjct: 414 RNAEEASEAAVAADQQAREGDKVVGEAIAQIERLATEVGNSTVAMGDLKRESDKIGSVLD 473

Query: 391 VIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQIIEAVQS 450
           VI+ +A+QTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRT  S  EI ++I  +QS
Sbjct: 474 VIKSVAQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEELIVGLQS 533

Query: 451 GAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAEEQTSVAED 510
           G  +    +++ +  +    E   +AG  L  IT+ V  I+ MN QIATAAE+Q++VAE+
Sbjct: 534 GTQQVATIMDNSRGLTDSSVELPRRAGSALASITRTVSTIQAMNSQIATAAEQQSAVAEE 593

Query: 511 ISRNLIEITRIATANQEAVQHTEQAGQRLHGLSGQLGEVTSR 552
           I+R+++ +  ++     A + T  +   L  L   L  +  R
Sbjct: 594 INRSVLNVRDVSEQTAAASEETAASSTELARLGTHLQALVGR 635