Pairwise Alignments

Query, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

Subject, 715 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  263 bits (671), Expect = 2e-74
 Identities = 159/357 (44%), Positives = 225/357 (63%), Gaps = 5/357 (1%)

Query: 192 ASINASAERTVWLGLLVMLASAVLVGLLSLWLVNRSLIEPI---RQLIEYVAQLSQGSFA 248
           A ++A   R   L L + L +AV VGL+ +WL+ RS+  PI     ++E +A   +G   
Sbjct: 351 AQMDAENTRGTLLELGLGLLAAV-VGLILVWLMARSVTRPILGVAHMLEDIAS-GEGDLT 408

Query: 249 ARVDSRREDELGRLARAANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQ 308
            R+   ++DELG+LA   N   D L   +  ++ + Q+  G + Q  +IA   + G   Q
Sbjct: 409 RRLAYDKQDELGQLAGWFNRFLDKLQPIIAEVKRSVQDARGTADQSAAIATQTSAGMEQQ 468

Query: 309 FQRTDQVATAMHEMSATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREI 368
           +++ DQVATA HEMSATAQ+VAR AA+AA+AA DAD + + G  V++ T   IG +  ++
Sbjct: 469 YRQVDQVATASHEMSATAQDVARSAAQAAQAARDADQATRDGLTVIEHTTHNIGALASDM 528

Query: 369 AGTATVIRDLEHDSTRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 428
           +   T +  L  +S +IG VLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVR
Sbjct: 529 STAMTQVEGLAANSEKIGSVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 588

Query: 429 SLAQRTAASIAEIHQIIEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVE 488
           +LAQRT  S+ E   +IE +Q+G    V ++ +  +++Q   EQV QA   L++I  AV 
Sbjct: 589 NLAQRTQESVEETRLVIEHLQNGTEAVVGSMGNSYRQAQGSVEQVGQAVTALRQIGDAVT 648

Query: 489 AIRDMNRQIATAAEEQTSVAEDISRNLIEITRIATANQEAVQHTEQAGQRLHGLSGQ 545
            I DMN QIA+AAEEQ++VAE+I+ N+  I  +  +  E    + +  Q L+ L+ Q
Sbjct: 649 VISDMNLQIASAAEEQSAVAEEINNNVATIRDVTESLSEQANESARVSQALNSLANQ 705