Pairwise Alignments

Query, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  246 bits (628), Expect = 2e-69
 Identities = 174/546 (31%), Positives = 287/546 (52%), Gaps = 21/546 (3%)

Query: 21  KSLRVQILSLLGGSVLAMLLIALVCFQFLS-SSVRGYAELVDGPLRASQLIDEANLQFKI 79
           +SL +   + LG  VLA+++ AL  F  L  +++R  ++ V+     S +      Q  +
Sbjct: 4   RSLNIAPRAGLGFGVLALMVFALGGFALLQMANMRQQSDQVENNWLPSVMAVGDMSQDLL 63

Query: 80  QVQEWKNVLLRGRQP---AEMDKYWQQFQAREQQVQQLLGQLIDNSDARLKASLQQLRDS 136
           +++     LL  R P   A+ ++   + +A   + + L   LI      +  + Q L D 
Sbjct: 64  RIRALTLRLLVNRDPQALAQNEQKLTEIKANLHRARTLYQGLI------VLPAEQVLFDR 117

Query: 137 HRQLGQAYAQGRQAFLAAGGDPVAGD--RAVKGVDRAASEQMS----ELVEQLRADARQR 190
            +     Y + ++  +         D  R V G     +++M+    ELV   +  A Q 
Sbjct: 118 FKAEEARYLERQEQVVTLSKANQLEDAIRVVNGEMNQLADEMAATLRELVTLNKTSANQ- 176

Query: 191 AASINAS--AERTVWLGLLVMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSFA 248
           AAS+  S  ++  +W+  +++L + V +GL  L  + RS++ P+ Q ++    ++ G   
Sbjct: 177 AASLAQSVFSQSRIWVIGMIVLTALVTIGLAVL--LTRSIVLPLAQSLKVAQGVASGDLT 234

Query: 249 ARVDSRREDELGRLARAANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQ 308
             +     DE  RL +A  ++++ L DT+ R+ +++ +L  AS +L  +  D  RG H Q
Sbjct: 235 GEISVCGRDEPARLQQALKSMQENLRDTIRRISESSNQLASASEELSCVTEDATRGLHQQ 294

Query: 309 FQRTDQVATAMHEMSATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREI 368
            Q  +Q ATA+++M+A  +EVA +A   ++A+ ++D  AQ G + +QQT+  I  +  ++
Sbjct: 295 SQEIEQAATAVNQMTAAVEEVASNAVATSQASRESDRIAQRGREQVQQTVVSIEALATDV 354

Query: 369 AGTATVIRDLEHDSTRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVR 428
               T + DL      I KVL+VIR IAEQTNLLALNAAIEAARAG+AGRGFAVVADEVR
Sbjct: 355 TDNVTQVEDLAQKVYGISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVR 414

Query: 429 SLAQRTAASIAEIHQIIEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVE 488
           +LA RT  S  EI Q+I  +Q G  +AV +++    R++   +  + AG  L+ I  A  
Sbjct: 415 ALAHRTQQSTQEIEQMISGIQQGTDQAVSSMQQSNTRARSTLDIAKSAGTALEEIASAFT 474

Query: 489 AIRDMNRQIATAAEEQTSVAEDISRNLIEITRIATANQEAVQHTEQAGQRLHGLSGQLGE 548
            I + N  IA+A+E+Q +VA ++ RNL+ I  +A         T  A   L  L+  L  
Sbjct: 475 LINERNLVIASASEQQAAVAREVDRNLMNIRDLAHQTSTGANQTSAASHDLSRLAVDLNT 534

Query: 549 VTSRLS 554
           + +R S
Sbjct: 535 LVARFS 540