Pairwise Alignments

Query, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  254 bits (649), Expect = 7e-72
 Identities = 139/340 (40%), Positives = 217/340 (63%), Gaps = 7/340 (2%)

Query: 213 AVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSFAARVDSRREDELGRLARAANTLRDF 272
           A++VG L+ WL+   + +P+RQ +   A++++G  +     +R DE+G+L  +   +   
Sbjct: 305 AMVVGALAAWLITLQITQPLRQTLAVAARIAKGDLSQVDTVQRRDEMGQLQTSMREMTLS 364

Query: 273 LADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVATAMHEMSATAQEVARH 332
           L D +G +     +L  A+ QL + + D     + Q + TDQVATAM++MSAT QEVA++
Sbjct: 365 LRDLIGGIDQGVGQLSQAATQLAASSEDTKLRINQQREETDQVATAMNQMSATVQEVAQN 424

Query: 333 AAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTRIGKVLEVI 392
           A +A+ AA +AD  AQ G+QV+ + I  I  +  ++      ++ L  +S RIG +L+VI
Sbjct: 425 AEQASLAATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAGESQRIGSILDVI 484

Query: 393 RGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQIIEAVQSGA 452
           + ++EQTNLLALNAAIEAARAGEAGRGFAVVADEVR LAQRT+ +  EI Q+I+++ +G 
Sbjct: 485 KSVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEEIGQLIDSLHNGT 544

Query: 453 VEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAEEQTSVAEDIS 512
            E  + ++S +  +++  E   +AG  L +IT  V +I+ MN+QIATA+EEQ+ VAE I+
Sbjct: 545 DEVTRLLDSSKSLTEQSVELSRRAGHALSQITDTVSSIQGMNQQIATASEEQSVVAEQIN 604

Query: 513 RNLIEITRIATANQEAVQHT-------EQAGQRLHGLSGQ 545
           R++I +  ++     A + T       EQ GQ+L G+ G+
Sbjct: 605 RSVINVRDVSDQTSAASEQTAASSGELEQLGQQLRGMVGR 644



 Score = 38.5 bits (88), Expect = 8e-07
 Identities = 78/362 (21%), Positives = 131/362 (36%), Gaps = 48/362 (13%)

Query: 214 VLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSFAARVDSRREDELGRLARAANTLRDFL 273
           +L GL  L L      +P  +L +Y   L Q   AA    R E     +    N LR   
Sbjct: 220 LLEGLAPLGLPRAISEQPGVELSKYRTSLDQYRRAA---VRVEQLQNNMEIMGNELRTVS 276

Query: 274 ADTVGR-LQDNAQELEGASGQLRSIAG-DMARGTHDQFQRTDQVATAMHEMSATAQEVAR 331
            D   R ++   +E   A   L S+A   M  G    +  T Q+   + +  A A  +A+
Sbjct: 277 LDLGKRKVEQRDREALAARSLLTSVALLAMVVGALAAWLITLQITQPLRQTLAVAARIAK 336

Query: 332 HAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTRIGKVLEV 391
                       D   Q    + + T+ +               RDL      IG + + 
Sbjct: 337 GDLSQVDTVQRRDEMGQLQTSMREMTLSL---------------RDL------IGGIDQG 375

Query: 392 IRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQIIEAVQSG 451
           +  +++    LA ++     R  +         D+V +   + +A++ E+ Q  E     
Sbjct: 376 VGQLSQAATQLAASSEDTKLRINQQREE----TDQVATAMNQMSATVQEVAQNAEQASLA 431

Query: 452 AVEAVKAIESGQQRSQEGAEQVEQ-AGQM-------------LQRITQAVEAIRDMNRQ- 496
           A  A +  + G Q   E   ++EQ AGQM              QRI   ++ I+ ++ Q 
Sbjct: 432 ATNADQQAQVGDQVVSEAIGRIEQLAGQMDHCLAAMQHLAGESQRIGSILDVIKSVSEQT 491

Query: 497 --IATAAEEQTSVAEDISRNLIEIT-RIATANQEAVQHTEQAGQRLHGLSGQLGEVTSRL 553
             +A  A  + + A +  R    +   +    Q     TE+ GQ +  L     EVT  L
Sbjct: 492 NLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTSTATEEIGQLIDSLHNGTDEVTRLL 551

Query: 554 SA 555
            +
Sbjct: 552 DS 553