Pairwise Alignments

Query, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  218 bits (556), Expect = 4e-61
 Identities = 126/345 (36%), Positives = 209/345 (60%), Gaps = 5/345 (1%)

Query: 206 LLVMLASAVLVGLLSLWL-VNRSLIEPIRQLIEYVAQLSQGSFAARVDSRREDELGRLAR 264
           + +++A A + GLL L + V  S +  + + +  +A+  +G    R+  + +DE G LA 
Sbjct: 294 IAMLIAVAAIAGLLGLLIPVLMSPLTTMGRAMRDIAE-GEGDLTRRLAVQNKDEFGELAT 352

Query: 265 AANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVATAMHEMSA 324
           + N   + +  ++  +    + +   S ++ S +     G+ +Q  RT+ VA A++E+ A
Sbjct: 353 SFNRFVERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGA 412

Query: 325 TAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTR 384
             QE+AR+AA+A++ A  A   A  G +V+++ I  +  +++ I+ +   I  L   +  
Sbjct: 413 ATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTALSQRISESCAQIETLNASTDE 472

Query: 385 IGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQI 444
           IGK+L+VI+GI++QTNLLALNAAIEAARAGEAGRGFAVVADEVR+LA RT  S  EIH++
Sbjct: 473 IGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHRM 532

Query: 445 IEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAEEQ 504
           I ++Q G+ EAV  + + Q  S++  +   QAG+ L  +TQ +  I  MN+ +ATA EEQ
Sbjct: 533 ITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASVTQRIGEIDGMNQSVATATEEQ 592

Query: 505 TSVAEDISRNLIEITRIATANQEAVQHTEQAGQRLHGLSGQLGEV 549
           T+V E ++   ++IT+I   NQ+ V++  +  +    L+ Q G +
Sbjct: 593 TAVVESLN---LDITQINALNQQGVENLNETLRHCDQLAQQAGRL 634



 Score = 28.9 bits (63), Expect = 6e-04
 Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 11/94 (11%)

Query: 473 VEQAGQMLQRITQAVEAIRDMNRQIATAA-------EEQT----SVAEDISRNLIEITRI 521
           VE+    +  ++ A   + D++ ++ +A+       EEQ+    SVA  I+        I
Sbjct: 358 VERIHASISEVSSATRLVHDLSEKVVSASNASIIGSEEQSMRTNSVAAAINELGAATQEI 417

Query: 522 ATANQEAVQHTEQAGQRLHGLSGQLGEVTSRLSA 555
           A    +A QH   A ++ HG    + E  S ++A
Sbjct: 418 ARNAADASQHASGASEQAHGGREVVEEAISAMTA 451