Pairwise Alignments

Query, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  223 bits (568), Expect = 1e-62
 Identities = 137/350 (39%), Positives = 197/350 (56%), Gaps = 4/350 (1%)

Query: 205 GLLVMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSFAARVDSRREDELGRLAR 264
           G  +    +V +GLL L    R L    ++L+    Q +     A++ +       RL  
Sbjct: 175 GFALAAGLSVPLGLLGLSWQQRGL----KRLLRLAEQTTSDPLIAQMFTDSRGVQARLEM 230

Query: 265 AANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARGTHDQFQRTDQVATAMHEMSA 324
           A  +    +   + RLQD+A+ L   + Q  ++A   + G   Q   T+QVA A+++M+A
Sbjct: 231 AMLSQDARMKTCLTRLQDSAEHLSDQARQSDALAHKSSTGLERQRVETEQVAAAVNQMAA 290

Query: 325 TAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTR 384
           T QEVA H    A A  +A+     G Q+  +T + I  ++  +  T   +  L  DS  
Sbjct: 291 TTQEVANHVQRTADATQEANRLTSQGRQIAGETREAIERLSAAVGETGQTVTQLAKDSDE 350

Query: 385 IGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQI 444
           IG V++VI+GIA+QTNLLALNAAIEAARAGE GRGFAVVADEVR LAQRTA S  +IH +
Sbjct: 351 IGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTAESTGQIHGL 410

Query: 445 IEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRITQAVEAIRDMNRQIATAAEEQ 504
           I  +Q  A  AV  +E+G +++QEG ++V QA + L  I++AV  I DM  QIA A EEQ
Sbjct: 411 IAKLQQTASNAVLTMETGHRQAQEGVDRVMQADEALVGISEAVANITDMATQIAAATEEQ 470

Query: 505 TSVAEDISRNLIEITRIATANQEAVQHTEQAGQRLHGLSGQLGEVTSRLS 554
           T+VA++ISRN+  I  +A    E  QH+    + L   +G    +  R +
Sbjct: 471 TAVADEISRNISTIAELADQTAEQAQHSALLSEELTSTAGSQYSLVERFN 520



 Score = 50.1 bits (118), Expect = 2e-10
 Identities = 76/351 (21%), Positives = 131/351 (37%), Gaps = 49/351 (13%)

Query: 88  LLRGRQPAEMDKYWQQFQAREQQVQQLLGQLIDNSDARLKASLQQLRDSHRQLGQAYAQG 147
           LLR  +    D    Q     + VQ  L   + + DAR+K  L +L+DS   L     Q 
Sbjct: 201 LLRLAEQTTSDPLIAQMFTDSRGVQARLEMAMLSQDARMKTCLTRLQDSAEHLSD---QA 257

Query: 148 RQAFLAAGGDPVAGDRAVKGVDRAASEQMSELVEQLRADARQRAASINASAERTVWLGLL 207
           RQ+   A       +R      R  +EQ++  V Q+ A  ++ A  +  +A+ T     L
Sbjct: 258 RQSDALAHKSSTGLER-----QRVETEQVAAAVNQMAATTQEVANHVQRTADATQEANRL 312

Query: 208 VMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQGSFAARVDSRREDELGRLARAAN 267
                 +               E I +L   V +  Q       DS   DE+G +     
Sbjct: 313 TSQGRQIA----------GETREAIERLSAAVGETGQTVTQLAKDS---DEIGGVVDVIK 359

Query: 268 TLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMARG-------THDQFQRTDQVATAMH 320
            + D         Q N   L  A    R  AG+M RG            QRT +    +H
Sbjct: 360 GIAD---------QTNLLALNAAIEAAR--AGEMGRGFAVVADEVRQLAQRTAESTGQIH 408

Query: 321 EMSATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEH 380
            + A  Q+ A +A            + + G +  Q+ +D +   +  + G +  + ++  
Sbjct: 409 GLIAKLQQTASNAV----------LTMETGHRQAQEGVDRVMQADEALVGISEAVANITD 458

Query: 381 DSTRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLA 431
            +T+I    E    +A++ +      A  A +  E  +  A++++E+ S A
Sbjct: 459 MATQIAAATEEQTAVADEISRNISTIAELADQTAEQAQHSALLSEELTSTA 509