Pairwise Alignments

Query, 555 a.a., Methyl-accepting chemotaxis protein CtpH from Pseudomonas putida KT2440

Subject, 645 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  248 bits (632), Expect = 7e-70
 Identities = 162/423 (38%), Positives = 240/423 (56%), Gaps = 11/423 (2%)

Query: 128 ASLQQLRDSHRQLGQAYAQGRQAFLAAGGDPVAGDRAVKGVDR--AASEQMSELVEQLRA 185
           A+    R    QLG   A+G    +  GG+ +   R  +  +R  A    + +L   L A
Sbjct: 221 AAFSGKRQLAEQLGADAAKG----VMTGGESLRSSRFSRDGERYLALGLPLRDLNWTLVA 276

Query: 186 DARQRAASINASAERTVWLGLLVMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQG 245
           +  +  + I A   + VWL  L+  A A LV LL + L+ R L+ PIR++   + Q+  G
Sbjct: 277 EVPE--SEIYAQMHQAVWLTSLIGGAVA-LVSLLLVVLLARGLVRPIRRVTAALVQIGSG 333

Query: 246 S--FAARVDSRREDELGRLARAANTLRDFLADTVGRLQDNAQELEGASGQLRSIAGDMAR 303
           +   + R+D  R+DELG LAR  N   D     +G +   ++ L  A  Q+  +  + A 
Sbjct: 334 AGDLSHRLDDSRQDELGDLARGFNRFLDSQRSLIGEVLSTSERLRRAVEQVTQVVDNTAE 393

Query: 304 GTHDQFQRTDQVATAMHEMSATAQEVARHAAEAARAADDADHSAQAGEQVMQQTIDIIGL 363
            +  Q + T+ VATA+HEM  T Q++AR+A +AA+A+  A   A    +V+Q++I  I  
Sbjct: 394 RSGRQQEMTEMVATAVHEMGLTVQDIARNAGDAAQASQSARDEALQAREVVQRSIRGIEG 453

Query: 364 VNREIAGTATVIRDLEHDSTRIGKVLEVIRGIAEQTNLLALNAAIEAARAGEAGRGFAVV 423
           ++ +I   A  +  L  +   + +VL VIR I+EQTNLLALNAAIEAARAGE GRGFAVV
Sbjct: 454 MSGDIGKAADAVSQLADEVASVDEVLAVIRSISEQTNLLALNAAIEAARAGEMGRGFAVV 513

Query: 424 ADEVRSLAQRTAASIAEIHQIIEAVQSGAVEAVKAIESGQQRSQEGAEQVEQAGQMLQRI 483
           ADEVR+LA+RT  S  E+ Q+I+ ++ GA  AV ++++GQQ +  G E  ++ G  L  I
Sbjct: 514 ADEVRTLARRTQLSTDEVQQMIQRLKLGAGSAVSSMQAGQQATGSGVESSQRTGASLSAI 573

Query: 484 TQAVEAIRDMNRQIATAAEEQTSVAEDISRNLIEITRIATANQEAVQHTEQAGQRLHGLS 543
           T  VE I DMN Q+ATA EEQ++V E+I+R +  I+ +A      VQ   +  Q L GL+
Sbjct: 574 TDQVEHISDMNHQVATATEEQSAVTEEINRTVQGISDLARETAAEVQGCREECQALRGLA 633

Query: 544 GQL 546
             L
Sbjct: 634 DDL 636



 Score = 32.3 bits (72), Expect = 6e-05
 Identities = 67/346 (19%), Positives = 122/346 (35%), Gaps = 58/346 (16%)

Query: 125 RLKASLQQLRDSHRQLGQAYAQGRQAFLAAGGDPVAGDRAVKGVDRAASEQMSELVEQLR 184
           R+ A+L Q+      L       RQ  L   GD   G        R+   ++    E+LR
Sbjct: 322 RVTAALVQIGSGAGDLSHRLDDSRQDEL---GDLARGFNRFLDSQRSLIGEVLSTSERLR 378

Query: 185 ADARQRAASINASAERTVWLGLLVMLASAVLVGLLSLWLVNRSLIEPIRQLIEYVAQLSQ 244
               Q    ++ +AER+   G    +   V   +  + L        ++ +       +Q
Sbjct: 379 RAVEQVTQVVDNTAERS---GRQQEMTEMVATAVHEMGLT-------VQDIARNAGDAAQ 428

Query: 245 GSFAARVDSRREDEL-GRLARAANTLRDFL---ADTVGRLQDNAQELEGASGQLRSI--- 297
            S +AR ++ +  E+  R  R    +   +   AD V +L D    ++     +RSI   
Sbjct: 429 ASQSARDEALQAREVVQRSIRGIEGMSGDIGKAADAVSQLADEVASVDEVLAVIRSISEQ 488

Query: 298 --------------AGDMARGTHDQFQRTDQVATAMHEMSATAQEVARHAAEAARAADDA 343
                         AG+M RG        D+V T       +  EV +        A  A
Sbjct: 489 TNLLALNAAIEAARAGEMGRGFAVV---ADEVRTLARRTQLSTDEVQQMIQRLKLGAGSA 545

Query: 344 DHSAQAGEQVMQQTIDIIGLVNREIAGTATVIRDLEHDSTRIGKVLEVIRGIAEQTNLLA 403
             S QAG+Q                  T + +   +     +  + + +  I++  + +A
Sbjct: 546 VSSMQAGQQ-----------------ATGSGVESSQRTGASLSAITDQVEHISDMNHQVA 588

Query: 404 LNAAIEAARAGEAGRGFAVVADEVRSLAQRTAASIAEIHQIIEAVQ 449
                ++A   E  R    ++D    LA+ TAA +    +  +A++
Sbjct: 589 TATEEQSAVTEEINRTVQGISD----LARETAAEVQGCREECQALR 630