Pairwise Alignments

Query, 354 a.a., Ribosomal RNA large subunit methyltransferase M from Pseudomonas putida KT2440

Subject, 366 a.a., 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM from Escherichia coli ECRC62

 Score =  328 bits (840), Expect = 2e-94
 Identities = 174/355 (49%), Positives = 232/355 (65%), Gaps = 6/355 (1%)

Query: 1   MNTLFMHCRPGFEGEVCAEISEHAARLGVAGYAKGKPQSASAEFVCSEEGGAERLMGELR 60
           MN + + CRPGFE E  AEI++ A +  + G+A+ K  +    + C +    ++L+ EL 
Sbjct: 1   MNKVVLLCRPGFEKECAAEITDKAGQREIFGFARVKENAGYVIYECYQPDDGDKLIRELP 60

Query: 61  FNQLIFPRQWARGGYV--ELPERDRISVLLAQLADF-PVFGSLWLEVLDSNEGKELSTFC 117
           F+ LIF RQW   G +   LP  DRI+ ++  L       G L +EV D+NE KEL  FC
Sbjct: 61  FSSLIFARQWFVVGELLQHLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELLKFC 120

Query: 118 RKFEVPLRKALEKAGRLV--DDPGRPRLLLTFISGRRVFVGVASASNSALWPMGIPRLKF 175
           RKF VPLR AL  AG L   + P RP + + FI+    + G + ++N++ + MGIPRLKF
Sbjct: 121 RKFTVPLRAALRDAGVLANYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKF 180

Query: 176 PREAPSRSTLKLEEAWHQFIPREQWEQRLGDDMTGVDLGASPGGWTYQLVRRGMLVTAID 235
           P +APSRSTLKLEEA+H FIP ++W++RL + M  VDLGA PGGWTYQLV+R M V ++D
Sbjct: 181 PADAPSRSTLKLEEAFHVFIPADEWDERLANGMWAVDLGACPGGWTYQLVKRNMWVYSVD 240

Query: 236 NGPMAESLMDTGLVQHLMADGFTWQP-KQPVDWMVCDIVEKPARTTSLIETWLGEGLCRE 294
           NGPMA+SLMDTG V  L  DGF ++P +  + WMVCD+VEKPA+  +L+  WL  G CRE
Sbjct: 241 NGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMVCDMVEKPAKVAALMAQWLVNGWCRE 300

Query: 295 AVVNLKLPMKQRYAEVRRLLDRMEATFKARKIRVSIACKQLYHDREEVTCHLRRL 349
            + NLKLPMK+RY EV   L  ++A      I   I  +QLYHDREEVT H+RR+
Sbjct: 301 TIFNLKLPMKKRYEEVSHNLAYIQAQLDEHGINAQIQARQLYHDREEVTVHVRRI 355