Pairwise Alignments

Query, 354 a.a., Ribosomal RNA large subunit methyltransferase M from Pseudomonas putida KT2440

Subject, 366 a.a., 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM from Dickeya dadantii 3937

 Score =  328 bits (840), Expect = 2e-94
 Identities = 175/355 (49%), Positives = 232/355 (65%), Gaps = 6/355 (1%)

Query: 1   MNTLFMHCRPGFEGEVCAEISEHAARLGVAGYAKGKPQSASAEFVCSEEGGAERLMGELR 60
           MN + ++CRPGFE E  AEI++ AAR  V G+ + K  S    F C +   A+RL+ EL 
Sbjct: 1   MNKVILYCRPGFEKECAAEITDKAARYNVYGFVRVKDNSGYVMFECYQHEDADRLIKELP 60

Query: 61  FNQLIFPRQWARGGYV--ELPERDRISVLLAQLAD-FPVFGSLWLEVLDSNEGKELSTFC 117
           F +L+F RQ    G +  +LP  DRI+ ++  L       G L +EV D+NE KEL  FC
Sbjct: 61  FRELVFARQMMVCGELLRDLPPEDRITPIVGMLTGAMERAGELRVEVPDTNESKELMKFC 120

Query: 118 RKFEVPLRKALEKAGRLV--DDPGRPRLLLTFISGRRVFVGVASASNSALWPMGIPRLKF 175
           RKF VPLR AL +   L+  +   RP + + FI+    +VG + ++N++ + MGIPRLKF
Sbjct: 121 RKFTVPLRAALRENRILLAQEKANRPVIHVLFIAPGCCYVGYSYSNNNSPFYMGIPRLKF 180

Query: 176 PREAPSRSTLKLEEAWHQFIPREQWEQRLGDDMTGVDLGASPGGWTYQLVRRGMLVTAID 235
           P +APSRSTLKLEEA+H F+P ++W++RLG  M  VDLGA PGGWTYQLV+R M+V A+D
Sbjct: 181 PADAPSRSTLKLEEAFHTFVPADEWDERLGSGMYAVDLGACPGGWTYQLVKRSMMVHAVD 240

Query: 236 NGPMAESLMDTGLVQHLMADGFTWQ-PKQPVDWMVCDIVEKPARTTSLIETWLGEGLCRE 294
           NG MA SLMDTG V H  ADGF ++ P+  + W+VCD+VEKPA+ T+ +  WL  G CRE
Sbjct: 241 NGMMAPSLMDTGQVIHHQADGFRFEPPRNNIYWLVCDMVEKPAKVTNRMADWLVNGWCRE 300

Query: 295 AVVNLKLPMKQRYAEVRRLLDRMEATFKARKIRVSIACKQLYHDREEVTCHLRRL 349
            + NLKLPMK+RY EV + L  +    +   I   I  K LYHDREEVT H RR+
Sbjct: 301 VIFNLKLPMKKRYEEVTQNLALLAQRLEENGINFEIHAKHLYHDREEVTVHARRI 355