Pairwise Alignments

Query, 354 a.a., Ribosomal RNA large subunit methyltransferase M from Pseudomonas putida KT2440

Subject, 365 a.a., Ribosomal RNA large subunit methyltransferase M from Alteromonas macleodii MIT1002

 Score =  244 bits (622), Expect = 3e-69
 Identities = 142/351 (40%), Positives = 203/351 (57%), Gaps = 9/351 (2%)

Query: 7   HCRPGFEGEVCAEISEHAARLGVAGYAKGKPQSASAEFVCSEEGGAERLMGELRFNQLIF 66
           +CRPG+E +   E++         GY   K  S    +   +    E+ + +   +  IF
Sbjct: 9   YCRPGYENDTANELTSRYGEAQCYGYPVSKKNSGFVLYHLYDGSQLEQTITQFAVHDSIF 68

Query: 67  PRQWAR--GGYVELPERDRISVLLAQLAD----FPVFGSLWLEVLDSNEGKELSTFCRKF 120
           PRQ         ++ + DR+  +L  L +    F +FG++ +E  D+ EGK L+ FCRKF
Sbjct: 69  PRQLVAVFATLNDIEKLDRVGQVLEALKEVEKPFQIFGAIDVEYPDTEEGKTLAKFCRKF 128

Query: 121 EVPLRKALEKAGRLV--DDPGRPRLLLTFISGRRVFVGVASASNSALWPMGIPRLKFPRE 178
            VPLR+AL KAG L   ++ G+P+L + F S     +G    S+++   +GI RLKFP +
Sbjct: 129 TVPLRQALRKAGWLTAKENLGKPKLHIFFESFEICHIGYTLPSHASGDHLGICRLKFPSD 188

Query: 179 APSRSTLKLEEAWHQFIPREQWEQRLGDDMTGVDLGASPGGWTYQLVRRGMLVTAIDNGP 238
           APSRSTLKLE+A    +  +Q  + L      VDLGA PGGWTYQLV+RGM V AIDNG 
Sbjct: 189 APSRSTLKLEDALVNMLSDKQQAKVLRSGGRAVDLGACPGGWTYQLVKRGMYVEAIDNGL 248

Query: 239 MAESLMDTGLVQHLMADGFTWQPK-QPVDWMVCDIVEKPARTTSLIETWLGEGLCREAVV 297
           +A+SLM TGLV+H  ADGFT++P+   VD +VCD++E+P R   L+  WL +     A+ 
Sbjct: 249 VADSLMSTGLVEHHAADGFTYRPQFGRVDLLVCDMIEQPDRVAKLMGDWLVKHWATHAIF 308

Query: 298 NLKLPMKQRYAEVRRLLDRMEATFKARKIRVSIACKQLYHDREEVTCHLRR 348
           NLKLPMKQRY  V   +  +     A +   ++  + LYHDR+EVT  + R
Sbjct: 309 NLKLPMKQRYETVVEAMTLLRGRLNALEDAFAVKVRHLYHDRDEVTVTIVR 359