Pairwise Alignments

Query, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

Subject, 514 a.a., PAS domain-containing protein from Dickeya dadantii 3937

 Score =  254 bits (648), Expect = 7e-72
 Identities = 176/547 (32%), Positives = 251/547 (45%), Gaps = 82/547 (14%)

Query: 1   MRNNQPITQRERTFPAQQRLISTTNAKGVITYCNDAFIEISGFTREELTGAPHNLVRHPD 60
           MRNNQP+TQRE  F     L+S T+    I Y NDAFI++SGF  +E+ G PHN VRHPD
Sbjct: 1   MRNNQPVTQREYVFDRDATLMSVTDVNSHIVYANDAFIQVSGFEPDEIDGQPHNFVRHPD 60

Query: 61  VPPAVFAHMWQTLKQGQPWMGIVKNRCKSGDHYWVNAYVTPIFDNNQVVGFESVRVKPTA 120
           +P   F  MWQTLK  +PW  +VKNR K+GDHYWV A   PI    +  G+ SVR +P+ 
Sbjct: 61  MPVEAFRDMWQTLKHQEPWTALVKNRRKNGDHYWVRANAVPIVRQGRTTGYMSVRTQPSR 120

Query: 121 EQIRRAEALYQRINQGKPPVPRRDKWLPVLQDWLPFILISQVGFLIGNWLGHSWGFALAA 180
           +++  AE LYQ +                                 GN L    G    A
Sbjct: 121 QEVDAAEKLYQTMRSE------------------------------GNNLKLHRGVLFRA 150

Query: 181 GLS---VPLGLLGLSWQQRGLKRLLRLAEQTT---------SDPLIAQMFTDSRG--VQA 226
           GL+     L L+ + W+ RGL  L  L              SD  I+  F       +  
Sbjct: 151 GLTGLFSRLKLISMRWRLRGLIMLAALISYVAFWTIHGDFDSDFYISSAFMTGMMLLLDG 210

Query: 227 RLEMAMLSQDARMKTCLTRLQDSAEHLSDQARQSDA-----------------LAHKSST 269
            LE  ++     +K     +     +  D   ++D                  L    ST
Sbjct: 211 LLEWQLIKPIEMVKQQALNIATGNANTIDYENRADEIGTIQRAIGQLGLMFRWLVDDIST 270

Query: 270 GLERQRVETEQVAAAVNQMAATTQEVANHVQRTADATQEAN-------RLTSQGRQIAGE 322
            +   R  ++++A     M+   +  A +VQ+TA A  E N         TS+  Q A  
Sbjct: 271 QVLNIRSASDELAHGSEDMSDHAERTAANVQQTAAAMNEINTTVQTNTTTTSEASQQAAT 330

Query: 323 TREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEM 382
             +A       +GE  +T+  +   S++I G+  +I  IA QTN+LALNAA+EAARAGE 
Sbjct: 331 ACDAAISGGRVIGEMEKTMDSIVASSEKIAGITSIIDNIAFQTNILALNAAVEAARAGEQ 390

Query: 383 GRGFAVVADEVRQLAQRTAESTGQIHGLIAKLQQTASNAVLTMETGHRQAQEGVDRVMQA 442
           G+GFAVVA EVR LAQR+A +  +I  LI              E+   Q + G   V  A
Sbjct: 391 GKGFAVVAGEVRNLAQRSASAANEIKQLI--------------ESSVEQVRYGSTHVRDA 436

Query: 443 DEALVGISEAVANITDMATQIAAATEEQTAVADEISRNISTIAELADQTAEQAQHSALLS 502
            ++   I   V +++ + + IA +T+EQT    EI R +  + ++  + A Q    A  S
Sbjct: 437 GDSTQNIVTRVNSVSQLISHIADSTKEQTVGLSEIGRAVEELEQITQKNASQVNACAQAS 496

Query: 503 EELTSTA 509
           ++L   A
Sbjct: 497 DQLKQQA 503