Pairwise Alignments

Query, 402 a.a., putative Ammonium transporter from Pseudomonas putida KT2440

Subject, 498 a.a., Ammonia channel from Xanthobacter sp. DMC5

 Score =  132 bits (333), Expect = 2e-35
 Identities = 128/450 (28%), Positives = 192/450 (42%), Gaps = 73/450 (16%)

Query: 12  VHGSNTLFILMGAILVLAMHAGFAFLEVG-TVRHKNQVNALSKILSDFAISALVYFFIGY 70
           V+  +  ++L  A+LVL M     FL  G  VR KN ++ L ++     I  L++   GY
Sbjct: 48  VNKGDVAWMLTSALLVLMMSVPGLFLFYGGLVRAKNMLSVLMQVAYSVCIVGLIWVLYGY 107

Query: 71  WIAY----------------GVNFFQPATTLAVDHGYAL---VKCFFLLTFAAAIPAIIS 111
            +A+                GV     A T +V  G A+   V   F +TFA   PA+I 
Sbjct: 108 SLAFTGGSPFIGGFSKAFLSGVTGESLAATFSV--GVAIPEWVYIAFQMTFAMITPALIF 165

Query: 112 GGIAERARFVPQLCATALIVAFVYPFFEGVVW-------------------NGNLGLQAW 152
           G  AER +F   +    L V FVY     +VW                   +G     A 
Sbjct: 166 GAFAERMKFSAVVLFVPLWVTFVYFPIAHMVWYWAGPDAIDAAAKALAAAADGTAKAAAQ 225

Query: 153 -----LQARFGAPFH----DFAGSVVVHAMGGWLALAAVLLLGARRGRYRDGRLVAFAPS 203
                + A  G  F     DFAG  VVH   G   L A +++G R G  ++    A +P 
Sbjct: 226 QALDAVNADSGYIFQLGAIDFAGGTVVHINAGIAGLVACIMVGKRLGYGKE----ALSPH 281

Query: 204 SIPFLALGSWILIIGWFGFNVMSAQTLQGVSGLVAINSLMAMVGGTLSA-----LLAGRN 258
           S+    +G+ +L +GWFGFN  S       + L  +N+ +A     +S      L+ G+ 
Sbjct: 282 SLTLTMVGASLLWVGWFGFNAGSNLEANATTALAMMNTFIATCAAGMSWMFVEWLVKGKP 341

Query: 259 DPGFLHNGPLAGLVAICAGSDLMHPVGALATGLVAGALFVWTFTAAQNRWKIDDVLGVWP 318
               L +G +AGLVA+   S     +G+L  GLV   +     TA +N    DD L V+ 
Sbjct: 342 SMLGLASGIVAGLVAVTPPSGFAGIMGSLVLGLVVSPICFIFCTAVKNALGYDDALDVFG 401

Query: 319 LHGLCGVWGGIACGVFGQVALGGMG----------GVSLVSQLLGSLMGVLVAL----AG 364
           +HG+ G+ G IA G+    +LGG G             + +Q++  L  V V +     G
Sbjct: 402 VHGIGGIVGAIATGILVSPSLGGTGIYDYTTGAVAAYDMTAQVIAQLKAVGVTVVWSGVG 461

Query: 365 GFAVYGAIRALHGLRLSHEQEFQGADLSLH 394
              +   I  + GLR S + E +G D++ H
Sbjct: 462 TAVILFVISVIVGLRPSTDVEREGLDINEH 491