Pairwise Alignments

Query, 402 a.a., putative Ammonium transporter from Pseudomonas putida KT2440

Subject, 445 a.a., ammonia channel protein from Pseudomonas simiae WCS417

 Score =  160 bits (404), Expect = 9e-44
 Identities = 125/418 (29%), Positives = 193/418 (46%), Gaps = 44/418 (10%)

Query: 11  LVHGSNTLFILMGAILVLAMHA-GFAFLEVGTVRHKNQVNALSKILSDFAISALVYFFIG 69
           +++  +T ++L    LVL M   G A    G VR KN ++ + +  +   + ++++   G
Sbjct: 31  VLNSGDTAWMLTATALVLFMTIPGLALFYGGMVRSKNILSVMMQCFAITGLISILWVVYG 90

Query: 70  YWIAY-------------------GVNFFQPATTLAVDHGYAL----VKCFFLLTFAAAI 106
           Y IA+                   G  F    T  ++    AL    V   F +TFA   
Sbjct: 91  YSIAFDTTGMEQGVVNFNSFFGGMGKAFLAGVTPASITGPAALFPEAVFITFQMTFAIIT 150

Query: 107 PAIISGGIAERARFVPQLCATALIVAFVYPFFEGVVWNGNLGLQAWLQARFGAPFHDFAG 166
           PA+I G  AER +F   L   A+    VY     +VW+GN GL       +     DFAG
Sbjct: 151 PALIVGAFAERMKFSAMLIFMAIWFTLVYAPIAHMVWSGNGGLM------WDWGVLDFAG 204

Query: 167 SVVVHAMGGWLALAAVLLLGARRGRYRDGRLVAFAPSSIPFLALGSWILIIGWFGFNVMS 226
             VVH   G   L A ++LG R+G          AP ++ +  +G+ +L IGWFGFN  S
Sbjct: 205 GTVVHINAGVAGLVACIVLGKRKGF----PTTPMAPHNLGYTLIGAAMLWIGWFGFNAGS 260

Query: 227 AQTLQGVSGLVAINSLMAMVGGTLSALLA-----GRNDPGFLHNGPLAGLVAICAGSDLM 281
           A    G +G+  + + +A     L  + A     G+     + +G +AGLVAI   +  +
Sbjct: 261 AAAANGTAGMAMLVTQIATAAAALGWMFAEWITHGKPSALGIASGVVAGLVAITPAAGTV 320

Query: 282 HPVGALATGLVAGALFVWTFTAAQNRWKIDDVLGVWPLHGLCGVWGGIACGVFGQVALGG 341
            P+GAL  GLVAG +  +  T+ + +   DD L  + +HG+ G+ G I  GVF   ALGG
Sbjct: 321 GPMGALVIGLVAGVICFFCATSLKRKLGYDDSLDAFGVHGIGGIVGAILTGVFAAPALGG 380

Query: 342 MGGVSLVS-----QLLGSLMGVLVALAGGFAVYGAIRALHGLRLSHEQEFQGADLSLH 394
            G V+ V+     Q  G    V+      + +   +  + GLR++ E+E  G DL+ H
Sbjct: 381 FGTVTDVAAQVWIQCKGVGFTVIYTAIVTYVILKVLDMVMGLRVTEEEEAVGLDLAQH 438