Pairwise Alignments

Query, 344 a.a., Outer membrane porin F from Pseudomonas putida KT2440

Subject, 326 a.a., porin from Pseudomonas simiae WCS417

 Score =  365 bits (938), Expect = e-106
 Identities = 203/351 (57%), Positives = 238/351 (67%), Gaps = 32/351 (9%)

Query: 1   MKLKNTLGLAIGSLVAATSIGAMAQGQGAVETEIFYKKEFFDSQRDFKNDGNLFGGSIGY 60
           MKLKNTLGLAIGSL+AATS G +AQGQGAVE E+FYKK++ DS +  + DG   G  IGY
Sbjct: 1   MKLKNTLGLAIGSLIAATSFGVLAQGQGAVEGELFYKKQYNDSVKHIE-DGFNPGARIGY 59

Query: 61  FLTDDVELRLGYDEVHNARGEDG---KNIKGSNTALDAVYHFNNP-YDAIRPYVSAGFSH 116
           FLTDD+ L L YD+ ++ R  DG   + IKG   +L A YHF     D++RPYV  GF H
Sbjct: 60  FLTDDLSLNLSYDKTNHTRSNDGTGNQKIKGDTGSLVAQYHFGQAGVDSLRPYVEGGFGH 119

Query: 117 QS---LGQTGRGGRDHSTFANVGAGAKWYITDMFYARAGVEAQYNIDQGDTEWAPSVGVG 173
           QS   +   G  GRD +TFA VG G K+Y T+  YARAGVEA Y +D G  +++  VG+G
Sbjct: 120 QSRTNVQADGHSGRDQTTFATVGTGVKYYFTNNLYARAGVEADYGLDNGKWDYSALVGLG 179

Query: 174 LNFGGSPKQAEAAPAPVAEVCSDSDNDGVCDNVDKCPDTPANVTVDADGCPAVAEVVRVE 233
           +NFGG+      AP P                       PA         P VA+VVRVE
Sbjct: 180 VNFGGNAGAVAPAPTPA----------------------PAPEPTPEPEAP-VAQVVRVE 216

Query: 234 LDVKFDFDKSVVKPNSYGDIKNLADFMKQYPQTTTVVEGHTDSVGPDAYNQKLSERRANA 293
           LDVKFDFDKSVVKPNSYGD+KNLADFM QYP T   V GHTDSVGPDAYNQKLS+RRA+A
Sbjct: 217 LDVKFDFDKSVVKPNSYGDVKNLADFMAQYPATNVEVAGHTDSVGPDAYNQKLSQRRADA 276

Query: 294 VKQVLTQQYGVESSRVDSVGYGETRPVADNATEEGRAVNRRVEAQVEAQAK 344
           VKQVL +  GV  SR+ +VGYGE+RPVADNATE GRAVNRRVEA VEAQA+
Sbjct: 277 VKQVLVKD-GVAPSRITAVGYGESRPVADNATEAGRAVNRRVEASVEAQAQ 326