Pairwise Alignments

Query, 307 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., CnmA from Pseudomonas putida KT2440

 Score =  123 bits (308), Expect = 6e-33
 Identities = 88/284 (30%), Positives = 134/284 (47%), Gaps = 9/284 (3%)

Query: 13  LMVVFEALMQERNLTRAAEKLFVAQPTVSAALARLRAMFNDPLLVRVGNRMEPSARAEEV 72
           L+ +F+ L Q R++TRAAE+L  +QPT+S  LARLR   NDPL VR    M P+ RA+++
Sbjct: 12  LLQLFDVLYQCRSVTRAAEQLGQSQPTISIWLARLREQLNDPLFVRTPGGMAPTPRADQL 71

Query: 73  IKYLTPALDAMSVALSMTHDFDPLTSRMTFRIGLSDDVESGLLPPLLRALRVEAPNVVVV 132
           I      L+++    +    F   T++  FR+ +SD     LLP +L  LR  AP + + 
Sbjct: 72  IGPCREVLESLRRLTAWEPQFIAATAQRRFRLCVSDASHITLLPSILNHLRSHAPGIRLE 131

Query: 133 VQHVDYWRIPDLLAAGDVTVGISQTKGLPANAKRKVLRTLQARVVRADKSSTP-----LS 187
              +D       L +G+  + I     L     ++VL   +   V       P     +S
Sbjct: 132 AARID-GNTESALESGEADLAIGFVPWLGGGMYQQVL--FEQDWVCLSNPQHPRLGDGMS 188

Query: 188 LDEFCQRPHVQVSPTANTQGVVDDWLKDIGRERKVVLSVPQFSSLPAILAGTDLLACCPD 247
           L+ +    HVQ+S     Q +++  L   G ER+++L +P F  L  I+  TDLL   P 
Sbjct: 189 LERYRAEGHVQIS-FGTGQKLLEAGLARAGIERRIMLELPAFLGLGKIIGTTDLLGTLPR 247

Query: 248 YAAQGMERWGNLQAETLPFETAALELAMVWLSTTDSDPAERWLR 291
           +  Q +     LQ    PFE     +   W +    D   RWLR
Sbjct: 248 HIGQTLADMHGLQVHDCPFEVEGFTVKQHWHARYHQDNGNRWLR 291