Pairwise Alignments

Query, 274 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

Subject, 281 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  101 bits (252), Expect = 2e-26
 Identities = 72/250 (28%), Positives = 111/250 (44%), Gaps = 7/250 (2%)

Query: 21  GGIERIEAWFGSHGYDPHRHDTYSIGRTLAGVQSFHYKGSLRHGIPGNTLVLHPDELHDG 80
           G +E + A +    + PH H+ Y      +G Q F ++GS      G+ ++++PDELH G
Sbjct: 18  GDVEMLHARYYQQRFAPHVHEGYVFTVIESGAQRFWHRGSEHLAPVGSMVLINPDELHTG 77

Query: 81  MAGTDAGFRYRMAYVDPALIQNV-----LGGQPLPFIAGGLSSDPRLYHASEAFVQAVDH 135
               +AG+RYR  Y +   +  V     LG   +P     +  DP L  A     Q  + 
Sbjct: 78  ATAHEAGWRYRGFYPEHERVTGVLDELELGRHGMPSFKDSVIHDPALALAFSQLHQLSEA 137

Query: 136 ALEPLEEQDALYDLAIALRAVGGKPRGRKRLDYQ--AAERARAFIMEHLHVGITLDMLEQ 193
           +   L++Q A     +AL    G+        ++  A  RAR  +   L    +L+ L  
Sbjct: 138 SASALQQQTAWRQAVLALVQRHGQCAEPSAPGHEPLAVARARELLESQLADPPSLEALAA 197

Query: 194 ASGRERWSLSRDFRTLYGTSPYRFVTLRRLDCLRRMILDGFTLVDAALAAGFHDQSHMTR 253
           A     +  +R FR   G  P+ ++  RRL   R M+  G      A   GF DQSH++R
Sbjct: 198 AVNLSPFHFARVFRQATGLPPHAWLKQRRLARAREMLKHGLAASQVAFDLGFADQSHLSR 257

Query: 254 HFTRCYGVPP 263
            F + YGV P
Sbjct: 258 QFKQAYGVTP 267