Pairwise Alignments

Query, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 472 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  172 bits (437), Expect = 2e-47
 Identities = 137/467 (29%), Positives = 213/467 (45%), Gaps = 23/467 (4%)

Query: 20  MLAALAACGHQPTPAEPAVALQADPLANMPAGV--SKQP---LPERWWALYQDPQLNRWV 74
           ML AL  C   PT   PAV L A        G   S QP   L   WW LY D +LN   
Sbjct: 12  MLLALQGCSMAPTYQVPAVDLPAGYREQTSDGPWHSAQPSDQLAPEWWTLYNDSRLNDLQ 71

Query: 75  QQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTDMGVAATYGRSADDQTLAEATDSNA 134
           QQ L  N  LA A A+  A  A   +  A  +P           R +D + L   T    
Sbjct: 72  QQLLKANPDLAAALAHFDASQAYASQLHAGLFPQISASAQPLRQRQSDSRPLRGDTQ--- 128

Query: 135 PSQWQFNP-GLELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRLQVVAQTTRAYIDQC 193
           PS +  N  G  L+Y +D+WG++R  +     QA+AS   L + RL +  Q    Y+   
Sbjct: 129 PSVYNSNTAGFSLSYDLDLWGKIRNQVAAGDAQAQASGDDLAVARLSLQHQLATLYVQLN 188

Query: 194 TYAARLEAAKQALQTLDQSVQLSQRQRQAGVATALDSERLLGLREQVRAQLPMLSARRQM 253
              A+     ++L    Q++QL++ + +  +A+ LD  R      + +AQ   +  +R +
Sbjct: 189 GLDAQARILDRSLDDFRQALQLTRSRYEGKIASELDLTRAQNQLAEAKAQWDEIRGQRNL 248

Query: 254 ALYELSMLSGQA----SVAEATTCVAIPTLSVPLPAGDGWHLLERRPDVRQAERELQAAT 309
             + +  L G A    S++ +   +++P +   LP+    HLL+RRPD+  AER + AA 
Sbjct: 249 TEHAIGELVGVAASDFSLSPSPQLISLPGIPSQLPS----HLLQRRPDIAAAERRVFAAN 304

Query: 310 LETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIR---WEFPNLKANRAR 366
               + +A  YP  S    +      + NL  +    + +GPL+    ++   L AN  R
Sbjct: 305 ANIGVAKAAWYPDFSLTGLIGGQTQGVGNLLSAGNRYWALGPLVNLPIFDGGRLSANE-R 363

Query: 367 VSKAEALQRAQVARYRGVALSALKDVRQALARYDGERQRLQALDAALAHSQHSFALAQGN 426
            +KAE  + +  A YR   L A+++V   LA+    +Q  Q   AA   +QH+ +LA  +
Sbjct: 364 QAKAEFEEAS--AHYRSQVLKAVREVEDNLAQLRDLQQEAQDEQAAADAAQHTQSLAMNS 421

Query: 427 YRAGTVDGLALLDSEREMISLRANHTEARGRLAQAQVNLFRALGGRW 473
           Y+AG V  L ++ ++   +  +      + R  QA V L  ALGG W
Sbjct: 422 YQAGAVSYLDVVTAQTAALQAQRTLQAVQTRQLQASVGLVTALGGGW 468