Pairwise Alignments

Query, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 471 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  176 bits (445), Expect = 2e-48
 Identities = 135/463 (29%), Positives = 219/463 (47%), Gaps = 21/463 (4%)

Query: 20  MLAALAACGHQPTPAEPAVALQADPLANMPAGVSKQPLPER-----WWALYQDPQLNRWV 74
           ++ AL+AC        P    Q    AN+ A    +          WW  ++DP LN+ V
Sbjct: 11  LVLALSACA-----VGPDYKTQTPEAANITAAADAKQYDHAKFEGIWWQQFEDPTLNQLV 65

Query: 75  QQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTDMGVAATYGRSADDQTLAEATDSNA 134
            QAL  N+ L  A A ++A  A   +      P+     ++   +        +  +S  
Sbjct: 66  TQALQGNRDLRVAFARLRAARAIRDDASNDAMPTITSRASSDLAKGQIPGQTTKRVNSE- 124

Query: 135 PSQWQFNPGLELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRLQV--VAQTTRAYIDQ 192
               +++ GL++A+++D++G+++  ++     A+  AA  DL +LQV  +A+   AY   
Sbjct: 125 ----RYDLGLDMAWELDLFGRIQRNLEAT--DADQQAAEADLYQLQVTMIAELVDAYGQL 178

Query: 193 CTYAARLEAAKQALQTLDQSVQLSQRQRQAGVATALDSERLLGLREQVRAQLPMLSARRQ 252
                R   A   L+   +S  ++   R AGV   LD ER       V A +P L A + 
Sbjct: 179 RGAQLRERIALDNLKNQQESRTITVSLRDAGVGDQLDVERADARLAAVEASVPQLQAEQV 238

Query: 253 MALYELSMLSGQA--SVAEATTCVAIPTLSVPLPAGDGWHLLERRPDVRQAERELQAATL 310
                ++ L GQ    ++       +P ++  LP GD   LL+RRPD+  AER+L AAT 
Sbjct: 239 RERNRIATLLGQRPDKLSVDLGPKNLPAIAKALPIGDPGQLLQRRPDILSAERKLAAATA 298

Query: 311 ETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIRWEFPNLKANRARVSKA 370
              + +ADL+P+VS    L  +    + +G S A  + +GP I W   +L + RAR+  A
Sbjct: 299 RIGVAKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGA 358

Query: 371 EALQRAQVARYRGVALSALKDVRQALARYDGERQRLQALDAALAHSQHSFALAQGNYRAG 430
           +A     +A Y    L AL++   A + Y   +QRL +L      S+ +  LA   YR G
Sbjct: 359 DAEADGALATYEQQVLLALEESENAFSDYGKRQQRLVSLIRQSESSRAAADLAAIRYREG 418

Query: 431 TVDGLALLDSEREMISLRANHTEARGRLAQAQVNLFRALGGRW 473
           TVD L LLD++RE ++   +  +A   L +  V +++ALGG W
Sbjct: 419 TVDFLVLLDAQRERLAAEDSQAQAEVDLYRGIVAIYKALGGGW 461