Pairwise Alignments

Query, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 515 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  146 bits (368), Expect = 2e-39
 Identities = 124/473 (26%), Positives = 208/473 (43%), Gaps = 19/473 (4%)

Query: 12  ARLATALGMLAALAACGHQPTPAEPAVALQADPLANMPAGVSKQPLPE------RWWALY 65
           ++LA  +G+   L+AC   P    P V    +P     A   +Q  P        WW LY
Sbjct: 41  SKLAPTMGLALLLSACAIGPDYQRPEVV---EPAQFKEAQGWRQATPSDSLARGAWWELY 97

Query: 66  QDPQLNRWVQQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTDMGVAATYGRSADDQT 125
            D QLN  V +    NQ +AQAEA  +   A         +P+ D+ V  T        +
Sbjct: 98  GDRQLNDLVMRLNTANQTVAQAEARFRQAQALARSSRGAFYPTVDLSVGKTRASQGTGSS 157

Query: 126 LAEATDSNAPSQWQFNPGLELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRLQVVAQT 185
            A  + S++  +   N  L ++++ DIWG++R  ++     AEAS+A L  +RL   ++ 
Sbjct: 158 NASLSSSSSGIRDTLNAQLGVSWEADIWGKLRRGLEANEASAEASSADLAAMRLSQQSEL 217

Query: 186 TRAYIDQCTYAARLEAAKQALQTLDQSVQLSQRQRQAGVATALDSERLLGLREQVRAQLP 245
            ++Y+       +    +  L+T  +S+Q+++ Q +AGV+      +     +  +A L 
Sbjct: 218 VQSYLQLRVMDEQTRLLQATLETYQRSLQMTENQYRAGVSGKDAVAQAQTQLKTTQASLI 277

Query: 246 MLSARRQMALYELSMLSGQA----SVAEATTCVAIPTLSVPLPAGDGWHLLERRPDVRQA 301
            L  +R      +++L G+A    ++A +    A+P + V LP+     LLERRPD+  A
Sbjct: 278 DLIWQRAQLENAIAVLIGEAPANFNLAVSKDIPALPQIPVSLPS----QLLERRPDIASA 333

Query: 302 ERELQAATLETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIRWEFPNLK 361
           ER + AA     + +A  YP +S   +   S    A+        + +GP +     +  
Sbjct: 334 ERSVIAANANIGVAKAAYYPDLSLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDGG 393

Query: 362 ANRARVSKAEALQRAQVARYRGVALSALKDVRQALARYDGERQRLQALDAALAHSQHSFA 421
              A V +  A     VA+YR   L   ++V   + +           + AL  ++ S  
Sbjct: 394 QRSAEVDRTVASYDETVAKYRQTVLDGFREVENYMVQLKVLEDEAVVSNEALEAARESLR 453

Query: 422 LAQGNYRAGTVDGLALLDSEREMIS-LRANHTEARGRLAQAQVNLFRALGGRW 473
           L Q  Y+AG +  L ++  +   +S  R   T  + RL  A V L  ALGG W
Sbjct: 454 LTQNQYKAGLIAYLDVVTVQATALSNERTVLTLLQTRLV-ASVQLIAALGGGW 505