Pairwise Alignments

Query, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 480 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  227 bits (578), Expect = 8e-64
 Identities = 164/476 (34%), Positives = 242/476 (50%), Gaps = 29/476 (6%)

Query: 14  LATA-LGMLAALAAC---GHQPTPAEPAVALQAD---PLANMPAGVSKQPLPERWWALYQ 66
           LATA LG+L  L+AC   G   +  + A   + D    +A     V   P+P  WW LY+
Sbjct: 5   LATAALGLL--LSACQVVGPDYSLPDKAAINRGDLQGHIAGEGNNVVSAPVPADWWKLYK 62

Query: 67  DPQLNRWVQQALAHNQGLAQAEANVQAMLAGIGEFD-ARRWPSTDMGVAATYGRSADDQT 125
           DP+L+  V+QA+A N  L  A AN+Q       + + A  W         + G  A+ Q 
Sbjct: 63  DPRLDELVRQAMASNTDLRVAAANLQRARYQTQQAESAGGW---------SLGAKAEAQR 113

Query: 126 LAEATDS-----NAPSQWQFNPGLELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRLQ 180
           L E+ ++       P     + G+  +YQ D++G ++  I+ A+  A+A+ AA D+ R+ 
Sbjct: 114 LQESGEAFLLADKVPVGNIGSVGITTSYQFDLFGTLQRGIESAQASADAAQAAADIARIT 173

Query: 181 VVAQTTRAYIDQCTYAARLEAAKQALQTLDQSVQLSQRQRQAGVATALDSERLLGLREQV 240
           +VA   R+Y   C     L  A ++L    QS QL+QR R AG        R     + +
Sbjct: 174 LVADVVRSYTQVCAANEELAIANESLDLQAQSTQLTQRLRDAGRGDETQVTRSQTQYKSL 233

Query: 241 RAQLPMLSARRQMALYELSMLSGQ---ASVAEATTCVAIPTLSVPLPAGDGWHLLERRPD 297
           RA +P   A RQ  L+ LSML  +      A   TC  +P ++  LP GDG  LL+RRPD
Sbjct: 234 RADMPRYEALRQAGLFRLSMLLAKPVDQLPAGTGTCAELPHIAQLLPVGDGATLLKRRPD 293

Query: 298 VRQAERELQAATLETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIRWEF 357
           VRQAER+L AAT    +    LYP +S GA++  +   L NLG      +G GP+I W  
Sbjct: 294 VRQAERQLAAATARIGVATGALYPDISIGATV-GTVGLLDNLGQPATNRWGFGPMISWTV 352

Query: 358 PNLKANRARVSKAEALQRAQVARYRGVALSALKDVRQALARYDGERQRLQALDAALAHSQ 417
           P   A RARV +AEA  +  +A + GV L+A+++ +  LA+Y  + QR  AL  A   ++
Sbjct: 353 PTNGA-RARVHEAEAATQGALAHFDGVVLNAIRETQTGLAQYTAQLQRRDALAEAGESAK 411

Query: 418 HSFALAQGNYRAGTVDGLALLDSEREMISLRANHTEARGRLAQAQVNLFRALGGRW 473
            +       ++AG    LA L + R    +RA    A  ++A +Q++LF ALGG W
Sbjct: 412 EAAGQTHRFFQAGRASFLADLQATRTYTDVRAQLAAANTQVAMSQIDLFLALGGGW 467