Pairwise Alignments

Query, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 485 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  156 bits (395), Expect = 1e-42
 Identities = 121/447 (27%), Positives = 203/447 (45%), Gaps = 7/447 (1%)

Query: 29  HQPTPAEPAVALQADPLANMPAGVSKQPLPERWWALYQDPQLNRWVQQALAHNQGLAQAE 88
           +Q   A  A      P  +     S+    + W   + DP L + +Q AL +N+ L  A 
Sbjct: 24  YQRPEAPVAAQFPQGPAYSSAQAPSQAAAEQGWKQFFHDPALQQLIQTALVNNRDLRVAA 83

Query: 89  ANVQAMLAGIGEFDARRWPSTDMGVAATYGRSADDQTLAEATDSNAPSQWQFNPGLELAY 148
            N+ A  A      A  +P+  +    +  RS     L++  +S   SQ+    G+  +Y
Sbjct: 84  LNIDAYAAQYQIQRADLFPA--VSATGSGSRSRTPARLSQTGESTISSQYSAGLGIS-SY 140

Query: 149 QVDIWGQVRAAIQRARVQAEASAAALDLVRLQVVAQTTRAYIDQCTYAARLEAAKQALQT 208
           ++D++G+VR+  + A  +  A+  A    ++ +VA    AY+        L+  +  L  
Sbjct: 141 ELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANAYLTWQADKELLKLTQDTLDA 200

Query: 209 LDQSVQLSQRQRQAGVATALDSERLLGLREQVRAQLPMLSARRQMALYELSMLSGQASVA 268
            +QS +L+ R  + GVA+ALD  +     E  R  L   + +       L++L G    A
Sbjct: 201 YEQSFKLTSRSNEVGVASALDLSQSRTSVENARVALARYTRQVAQDENSLTLLLGTGLPA 260

Query: 269 EATTCVAIPTLSVPLPAGDGWHLLERRPDVRQAERELQAATLETDIVRADLYPKVSFGAS 328
             T+      L   +PAG    LL+RRPD+ QAE  L+AA       RA  +P ++  AS
Sbjct: 261 NITSKPLSDDLLSEVPAGLPSDLLQRRPDIVQAEYNLKAANANIGAARAAFFPSITLTAS 320

Query: 329 LTSSDHHLANLGDSRAVMFGIGPLIRWEFPNLKANRARVSKAEALQRAQVARYRGVALSA 388
             ++  +L  L    +  +   P I     N  + RA +  ++  +   VA Y     + 
Sbjct: 321 AGTASPNLGGLFKGGSGTWSFAPQINIPIFNAGSLRASLDYSKIQKEINVANYEKAIQTG 380

Query: 389 LKDVRQALARYDGERQRLQALDAALAHSQHSFALAQGNYRAGTVDGLALLDSEREMISLR 448
            ++V   LA  +  +Q+L A    +A +Q  + LA+  YR G    L  LD++R++ S  
Sbjct: 381 FQEVSDGLAARETYKQQLDAQRGFVAANQDYYRLAERRYRIGVDSNLTFLDAQRQLFS-- 438

Query: 449 ANHTEARGRLAQ--AQVNLFRALGGRW 473
           A  +    RLAQ  ++VNL++ALGG W
Sbjct: 439 AQQSLITDRLAQLTSEVNLYKALGGGW 465