Pairwise Alignments

Query, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 481 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  174 bits (441), Expect = 6e-48
 Identities = 131/470 (27%), Positives = 216/470 (45%), Gaps = 11/470 (2%)

Query: 13  RLATALGMLAALAACGHQPT---PAEPAVALQADPLANMPAGVS-KQPLPERWWALYQDP 68
           R+A     L +L+AC   P    P  P V   ++P     A  +   PL ERWW ++ D 
Sbjct: 3   RVAWLTLSLISLSACTVGPDFQRPQGPQVTQWSEPQGRQAASRAVNDPLQERWWDVFHDE 62

Query: 69  QLNRWVQQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTDMGVAATYGRSADD-QTLA 127
           QL+   ++AL  N  L  A + +Q   A      A R+P+ +      Y R  +  + L+
Sbjct: 63  QLSALTRRALTDNLDLKLASSRLQQSRAVRQVTTAERYPNVNAN--GDYQRKRNSGKGLS 120

Query: 128 EATDSNAPSQW-QFNPGLELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRLQVVAQTT 186
           + + +N  S + Q++ G   ++++D WG+V+   + A    + +      V L V+A+T 
Sbjct: 121 DPSGNNGRSAFNQWDMGFSASWELDFWGRVKRETEAADATLQVAENDRRAVLLSVLAETA 180

Query: 187 RAYIDQCTYAARLEAAKQALQTLDQSVQLSQRQRQAGVATALDSERLLGLREQVRAQLPM 246
           + YI            +Q L     S++LSQ +   GVAT LD          + A+LP 
Sbjct: 181 QNYIQLRGVQNTRAVTEQNLDVARHSLKLSQLRLADGVATDLDVAEAAAQVAAIEARLPD 240

Query: 247 LSARRQMALYELSMLSG---QASVAEATTCVAIPTLSVPLPAGDGWHLLERRPDVRQAER 303
           L  R+   +  LS+L G   QA  A+ +   A+P     +  G    L ERRPD+RQAE 
Sbjct: 241 LQQRQDQLINALSLLMGEPPQALHAQLSKDAAVPQTQRQVAIGLPSELAERRPDIRQAEA 300

Query: 304 ELQAATLETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIRWEFPNLKAN 363
            L AAT    + + D YP+++   SL S    L++ G   +  F  GP       N    
Sbjct: 301 RLHAATASIGVAKGDFYPRITLSGSLGSQAMQLSDFGSWGSRAFAFGPQFSLPLFNGGRL 360

Query: 364 RARVSKAEALQRAQVARYRGVALSALKDVRQALARYDGERQRLQALDAALAHSQHSFALA 423
           +  ++  EA Q+     Y+   L A  ++   L RY+  + R  +L  A+  +Q +   A
Sbjct: 361 QGMLNLREAQQQEAALAYQQTVLRAWHEIDDQLTRYNASQLRRDSLAEAVRQNQIALRTA 420

Query: 424 QGNYRAGTVDGLALLDSEREMISLRANHTEARGRLAQAQVNLFRALGGRW 473
           Q  Y  G VD + +L  +  +++ +    ++   ++ A V L++ALGG W
Sbjct: 421 QQQYVEGVVDFVNVLTVQSALLATQEQWVDSSTGVSLAMVGLYKALGGGW 470