Pairwise Alignments

Query, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 498 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  155 bits (391), Expect = 4e-42
 Identities = 129/469 (27%), Positives = 204/469 (43%), Gaps = 19/469 (4%)

Query: 18  LGMLAALAACGHQPTPAE-PAVALQA-------DPLANMPAGVSKQPLPER-----WWAL 64
           L ++AAL   G    P+  P +   A       D  A  PAG ++    E      WW  
Sbjct: 17  LPLMAALVLAGCATVPSGLPEIQTTAQFKEQGKDQGATPPAGFTRAVPSESQPRGAWWLA 76

Query: 65  YQDPQLNRWVQQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTDMGVAATYGRSADDQ 124
           + DP LN  V++A  HN  +  A A +    A     DA R P   +G  A  G   D  
Sbjct: 77  FNDPTLNALVEKADIHNNDIQAAAARLAEARALARTADADRLPQIGLGAGANRGAGLD-- 134

Query: 125 TLAEATDSNAPSQWQFNPGLELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRLQVVAQ 184
              +AT S  P+    N G   +Y+VD++G++  A + AR+ A    A L   RL V AQ
Sbjct: 135 ---KATASTRPATMT-NIGATFSYEVDLFGRLSGASKAARLDAAGREALLQSTRLAVQAQ 190

Query: 185 TTRAYIDQCTYAARLEAAKQALQTLDQSVQLSQRQRQAGVATALDSERLLGLREQVRAQL 244
           T + Y+      A     ++ ++    +++LSQR+ QAG    LD  R+        +  
Sbjct: 191 TAQTYLQLRALDAERALVREQVEAYRDTLRLSQRREQAGDIAELDVARVQTEVSSTESDA 250

Query: 245 PMLSARRQMALYELSMLSGQASVAEATTCVAIPTLSVPLPAGDGWHLLERRPDVRQAERE 304
             L  +R    + L++L G ++ +         T+   +PAG    +L RRPDV  A+  
Sbjct: 251 LALDRQRAQVEHALAVLVGDSASSFGLRTDEWSTVLPNIPAGVPSTVLMRRPDVSAAQSA 310

Query: 305 LQAATLETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIRWEFPNLKANR 364
           + AA     + +A  +P +S   +   +   + +L    A  +G+G L+     +     
Sbjct: 311 VLAAQARVGVAQAAWFPDISLTGAAGYASPEIGDLFKWSARSWGVGALLSLPIFDGGRRE 370

Query: 365 ARVSKAEALQRAQVARYRGVALSALKDVRQALARYDGERQRLQALDAALAHSQHSFALAQ 424
           A V  A A     +A YR  AL A ++V   LA     +++      A+  +Q + +L+ 
Sbjct: 371 AGVQGANAQLDGALASYRTQALVAFQEVEDQLAAIRILQEQSVVQAQAVTSAQRATSLSD 430

Query: 425 GNYRAGTVDGLALLDSEREMISLRANHTEARGRLAQAQVNLFRALGGRW 473
             YR G +  L LLD+ R  +  R    + +    QA V L RA+GG W
Sbjct: 431 TRYRNGYISQLDLLDARRSELRNRRQALQVKSAQYQAAVALVRAIGGGW 479