Pairwise Alignments

Query, 473 a.a., putative Multidrug efflux MFS outer membrane protein from Pseudomonas putida KT2440

Subject, 475 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  154 bits (390), Expect = 5e-42
 Identities = 131/469 (27%), Positives = 214/469 (45%), Gaps = 16/469 (3%)

Query: 14  LATALGMLAALAACGHQPTPAEPAVALQA----DPLANMPAGVSKQPLPERWWALYQDPQ 69
           + TAL     LA C   PT   PA  +      DP    PAG +   L   W   + DP+
Sbjct: 6   IPTALAAAMLLAGCSLIPTYERPAAPVPTTFPGDPA--QPAGQAAANLA--WQDFFTDPR 61

Query: 70  LNRWVQQALAHNQGLAQAEANVQAMLAGIGEFDARRWPSTDMGVAATYGRSADDQTLA-E 128
           L   +Q ALA+N+ L  +  N++   A      +  +P+  +GV  T  RS  +     E
Sbjct: 62  LAGLIQTALANNRDLRVSVLNIEQARAQFQIQRSALFPA--LGVTGTGSRSGPNPYQGIE 119

Query: 129 ATDSNAPSQWQFNPGLELAYQVDIWGQVRAAIQRARVQAEASAAALDLVRLQVVAQTTRA 188
               +  SQ+  N G   A+++D +G++RA   +A  Q  A+      V++ ++A     
Sbjct: 120 PGMGSVASQYSVNFGFT-AWELDFFGRIRALKDQALAQYLATDETRKAVQISLIASVANG 178

Query: 189 YIDQCTYAARLEAAKQALQTLDQSVQLSQRQRQAGVATALDSERLLGLREQVRAQLPMLS 248
           ++        LE  +Q + T ++SV+L++ +   GV++ LD +   G  E  RA      
Sbjct: 179 WLTLLADDELLEITRQTMVTREESVRLTKLRFDNGVSSELDYQAANGQFESARAAYAQQL 238

Query: 249 ARRQMALYELSMLSGQASVAEATTCVAIPTLSVP----LPAGDGWHLLERRPDVRQAERE 304
             R      L++L G    AEAT   A     +     +PAG    LL  RPD+R AE++
Sbjct: 239 RARAEDENALALLLGAPVPAEATAGGAKGLNGIKPMPDVPAGLPSDLLAERPDIRSAEQQ 298

Query: 305 LQAATLETDIVRADLYPKVSFGASLTSSDHHLANLGDSRAVMFGIGPLIRWEFPNLKANR 364
           L AA       RA+ +P+VS  +S+ ++    + L D  +  +   P +     N  +NR
Sbjct: 299 LIAANANIGAARANFFPRVSLTSSIGTASTEFSGLFDRGSKAWSFAPTVTLPIFNAGSNR 358

Query: 365 ARVSKAEALQRAQVARYRGVALSALKDVRQALARYDGERQRLQALDAALAHSQHSFALAQ 424
           A +  A+A +   VA+Y     +A ++V  ALA      ++++AL A        F L+ 
Sbjct: 359 ATLESAKAGREIAVAQYEKSIQTAFREVADALAGRATLGEQVRALRAQADSEAVRFKLSD 418

Query: 425 GNYRAGTVDGLALLDSEREMISLRANHTEARGRLAQAQVNLFRALGGRW 473
             YR G    L LLD++R + + + +    +    Q QV L++ LGG W
Sbjct: 419 LRYRNGIASALDLLDAQRSLFAAQQSAVTTQLLQLQNQVTLYKTLGGGW 467