Pairwise Alignments

Query, 425 a.a., putative Multidrug efflux MFS membrane fusion protein from Pseudomonas putida KT2440

Subject, 432 a.a., multidrug resistance efflux pump from Agrobacterium fabrum C58

 Score =  228 bits (580), Expect = 4e-64
 Identities = 145/374 (38%), Positives = 216/374 (57%), Gaps = 18/374 (4%)

Query: 48  AVDKPSPAETEQRPSAKTRRRLAVIASGSLAAITLLAFTSY-WFSTGRYLETTDDAYVRA 106
           A  + +PA     P AK R  L  I +  LA +    +  Y W+  GR++ +TDDAY++ 
Sbjct: 61  APPQATPAPAVAAPKAKKRSPLLPIFA--LALLVGAGWYGYNWWIDGRFMVSTDDAYIQG 118

Query: 107 DWVALSPRVAGYVAKVEVADDQPVKAGDVLVRLQNRDYRARLDQARAGVTEAQAALAAAQ 166
           D   ++P+VAGYVAKV V ++Q VKAGD LV L + DYR   +QA A +   Q +L    
Sbjct: 119 DIAVIAPKVAGYVAKVNVVENQEVKAGDPLVTLDDGDYRIAFEQADAQIRTEQLSLKRID 178

Query: 167 ASQQVATERIDQQQQAILQAEAVVRSATAEQRRSELDVQRYRGLVRDDAATVQRLETASA 226
           A Q +  E    Q+QA+ Q  A+     A  R +E+  +R   L   D  TV   + A  
Sbjct: 179 A-QIIGGEAA--QEQAVAQKGAL----DAALRGAEITQKRATELQAKDVGTVAASDNAQV 231

Query: 227 HASQAQAALQGAQAALRQQRSQLAMAKARAAQAEAELQQRAAALARAQAHQQLAEQDEQD 286
              QA+A +   +AA+   ++ + + +A+  +AE+ +  R+  L++ +A + LA      
Sbjct: 232 ALDQARANVVAGEAAISSAKANVELLRAQREEAESTI--RSLQLSKDKAARDLAF----- 284

Query: 287 TVIRAPITGVVGQRRVRTGQYVVPGQPLLAVVPLQQAYVVANYKETQLARMRPGQPVEIR 346
           TV++AP  GV+G   V+TG  V  G+ L ++VP+ + Y+ AN+KETQLAR+ PG  V + 
Sbjct: 285 TVLKAPYDGVIGNLAVQTGDLVSVGKRLASLVPMNELYIDANFKETQLARVVPGSKVRVH 344

Query: 347 VDSFASQPLHGHVASFSPASGNVFALLPSDNATGNFTKIVQRFPVRILLDK-PLDGPQVL 405
           VD+F  + + G V S SP SG+VF++LP +NATGNFTK++QR PVRI+  K  L    + 
Sbjct: 345 VDAFDDEAIEGTVQSISPGSGSVFSMLPPENATGNFTKVIQRVPVRIVFSKEDLAKHNLR 404

Query: 406 PGMSVVSTVDTRPA 419
            G+SVV  VDTR A
Sbjct: 405 AGLSVVVDVDTRTA 418