Pairwise Alignments

Query, 504 a.a., putative EmrB/QacA family drug resistance transporter from Pseudomonas putida KT2440

Subject, 508 a.a., Multidrug efflux system EmrAB-OMF, inner-membrane proton/drug antiporter EmrB (MFS type) from Sphingobium sp. HT1-2

 Score =  199 bits (506), Expect = 2e-55
 Identities = 125/481 (25%), Positives = 233/481 (48%), Gaps = 19/481 (3%)

Query: 23  FMAGMNVHVTSAALPEIRGSLGASFEEGSWISTAYLVAEIVMIPLTAWLVDVFSLRRVMW 82
           FM  +++ + + ++P I G+LG S ++G+WI T+Y VAE + +PLT WL   F + R   
Sbjct: 27  FMVVLDLTIANVSVPHIAGNLGISGDQGTWIITSYAVAEAICVPLTGWLALRFGVVRTFI 86

Query: 83  TGSLIFLIASVACSWAPNLEAMIVIRVIQGAAGAVLIPLSFQLIITELPASKMAMGMALF 142
              + F   S+ C  +  L  ++  R+ QG  G  ++P+S  L++   P       M L+
Sbjct: 87  WAMIGFGFFSMMCGLSTTLGMIVAARLGQGICGGPIMPMSQTLLLRIFPPEMRPRAMGLW 146

Query: 143 SLANSVAQAAGPSIGGWLTDAYSWRWIFYLQLFPGIALLLAIAWSIEAKPMKLELLRKG- 201
           ++   +  A GP +GG+++D +SW WIF++ L   IA L   A     +P++ +   +  
Sbjct: 147 AMTTLLGPAMGPIVGGYISDNWSWHWIFFINL--PIAALCVFAAMAMLRPVETDTAHQPI 204

Query: 202 DWLGIAAMVIGLGGLQIVLEEGGRLDWFGSPLIVGMSVVAAIALVVFVVTQLFGQRAFIN 261
           D +G+  ++  +G LQ++L+ G   DWF  PLI+ ++++A I  +VF++ +L  +   ++
Sbjct: 205 DKIGLCLLIFWIGCLQVMLDIGRDHDWFSDPLILTLAILAGIGFIVFIIWELTEEHPIVD 264

Query: 262 LRLLGHYNFGVASVAMFIFGAATFGLVFLVPNYLSQLQGFSAHDVGVALIAYGVVQLLLA 321
           LR+  H  F      + +   A F  + ++P +L    G++A   G+      +  ++ A
Sbjct: 265 LRVFRHIGFSSGVFTLALAFGAYFSSIVVIPQWLQMSMGYTATWSGIVTAFTAMAAVMSA 324

Query: 322 PLMPRLMGWTSAKFMVASGFLIMALGC---WLGAGLSADSADNVIIPSTVVRGIGQPFIM 378
           P   R  G    + M++    +  LGC   W     S      + +P   V+G   PF M
Sbjct: 325 PFAARFTGKVDPRIMISGA--VFWLGCMTLWRAHWTSGIDFFGLALPQ-FVQGFAMPFFM 381

Query: 379 VALSVLAVAGLDKREAGSASAVFSMLRNLGGAIGTAGLTQLVATRERFHSERI--HEQVT 436
           + L+ L +  +   E  SA+ + + LR +  AI T+    LV T     S+R+  +E   
Sbjct: 382 IPLTTLTLGSVPPSETASAAGLQNFLRTMAIAIATS----LVLTGWS-DSQRVSRNELAG 436

Query: 437 LFEPSVQARINQTVQSWLPPQQQMLEALEATIRREAYLMAYSDAFYLACLALVGCALAAL 496
             +P    R    +       +Q+ + +   + +EA  ++    F+++ L L   A+   
Sbjct: 437 ALQPDDAQR---ALSGMGMTTEQIRQTISNLVEQEAIAISVDYVFFISALVLFAAAVIVW 493

Query: 497 L 497
           L
Sbjct: 494 L 494