Pairwise Alignments

Query, 504 a.a., putative EmrB/QacA family drug resistance transporter from Pseudomonas putida KT2440

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  250 bits (639), Expect = 7e-71
 Identities = 137/482 (28%), Positives = 253/482 (52%), Gaps = 7/482 (1%)

Query: 13  VAVLGGLFGCFMAGMNVHVTSAALPEIRGSLGASFEEGSWISTAYLVAEIVMIPLTAWLV 72
           +  +G     FM  ++  + + ALP I G+LG S+E+G+W+ T++ V+  + +PLT WL 
Sbjct: 16  LTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPLTGWLS 75

Query: 73  DVFSLRRVMWTGSLIFLIASVACSWAPNLEAMIVIRVIQGAAGAVLIPLSFQLIITELPA 132
             F   ++    +L+F++AS  C  A ++  ++  RV+QG     L P++  L+I   P 
Sbjct: 76  RRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLIAVYPP 135

Query: 133 SKMAMGMALFSLANSVAQAAGPSIGGWLTDAYSWRWIFYLQLFPGIALLLAIAWSIEAKP 192
           +K  M +AL ++   VA  AGP +GGW+TD+YSW WIF++ +  G+     +   +  +P
Sbjct: 136 AKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPIGLFAAAVVRQQMRTRP 195

Query: 193 MKLELLRKGDWLGIAAMVIGLGGLQIVLEEGGRLDWFGSPLIVGMSVVAAIALVVFVVTQ 252
           + +   +  D++G+  ++IG+G LQ+VL++G  LDWF S  I+  S+++ + L VFV+ +
Sbjct: 196 V-VTSRQPMDYIGLLTLIIGVGALQVVLDKGNDLDWFESSFIIVGSLISVVFLAVFVIWE 254

Query: 253 LFGQRAFINLRLLGHYNFGVASVAMFIFGAATFGLVFLVPNYLSQLQGFSAHDVGVALIA 312
           L  +   +NLRL  H NF + ++ +    A  FG+  ++P +L    G++A   G+A+  
Sbjct: 255 LTDRHPVVNLRLFVHRNFRIGTIVLVGGYAGFFGINLILPQWLQTQMGYTATWAGLAVAP 314

Query: 313 YGVVQLLLAPLMPRLMGWTSAKFMVASGFLIMALGCWLGAGLSADSADNVIIPSTVVRGI 372
            G++ ++++P + +       + +    FL +   C++ AG +++     +    +  GI
Sbjct: 315 IGLLPVIMSPFVGKYAHRFDLRVLAGLAFLAIGTSCYMRAGFTSEVDFQHVALVQLFMGI 374

Query: 373 GQP-FIMVALSVLAVAGLDKREAGSASAVFSMLRNLGGAIGTAGLTQLVATRERFHSERI 431
           G   F M  LS+L ++ L   +    S + + LR LGG+   +  T +   R   H   +
Sbjct: 375 GVALFFMPTLSIL-LSDLPPHQIADGSGLATFLRTLGGSFAASLTTWIWIRRADQHHAYL 433

Query: 432 HEQVTLFEPSVQARINQTVQSWLPPQQQMLEALEATIRREAYLMAYSDAFYLACLALVGC 491
            E ++ F+P+ +     T++       Q    LE  +  +AY+M+  D F L      G 
Sbjct: 434 SEHISQFDPTTR----HTLEQLGGASPQSYAQLEQILNGQAYMMSTVDYFTLMSWVFAGL 489

Query: 492 AL 493
            L
Sbjct: 490 IL 491