Pairwise Alignments

Query, 1027 a.a., Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1069 a.a., Efflux pump membrane transporter BepE from Xanthobacter sp. DMC5

 Score =  516 bits (1330), Expect = e-150
 Identities = 337/1038 (32%), Positives = 556/1038 (53%), Gaps = 48/1038 (4%)

Query: 7    FVRRPVLALVVSSLIILMGLFAMGKLPIRQYPLLESSTITISTEYPGASAELMQGFVTQP 66
            F+ RPVL+ V++ + +L+GL ++ +LP+ QYP +   T+++ST YPGASA+ M   V  P
Sbjct: 6    FIERPVLSNVLALVFVLIGLVSLIRLPVSQYPNIVPPTVSVSTSYPGASAKTMIDTVALP 65

Query: 67   ITQAVSSVEGIDYLSS-SSQQGRSLITLRMVLNRDSTQALAETMAKVNQVRYRLPEKAYD 125
            I Q V+ VEG+ Y+ S S+  G   + +   +  D   A      +VN     LP     
Sbjct: 66   IEQQVNGVEGMIYMQSWSASDGTYTLVVSFAIGTDPNMAQVLVQNRVNIALASLPTAVQA 125

Query: 126  PVVELSAGDSTAVAYVGFAS-----DSLSIPELSDYLSRVVEPQFSGIDGVAKVQSFGGQ 180
              V +    ++ + +V   S     D L    L++Y    ++ +   +DGVA V  FG  
Sbjct: 126  QGVTILQKGTSILEFVTLISPDGRYDGLF---LNNYAIINIQNELERVDGVANVAVFGAG 182

Query: 181  RLAMRLWLDSEQMAGRGVTAADVAQAVRANNYQATPGQV---------RGQYVLADIQVD 231
              AMR+W+D ++M   G+T  DV+ A++  +   TPGQ+           QY    + V 
Sbjct: 183  TYAMRVWMDPDRMQAFGLTPTDVSNAIQKQSQIVTPGQLGLPPAPSNASFQYT---VNVS 239

Query: 232  TDLTRVEDFRELIIRNDGTD---LVRLRDIGTVELSAAATQTSATMDGKPAVHLGLFPTP 288
              L  V+D+  +I++ D +D   +VR+RDIG VEL A +       D KPA  +G+F  P
Sbjct: 240  GRLDDVKDYENIIVKVDNSDGGRIVRIRDIGRVELGAQSYSKDFMQDNKPAAGIGIFQLP 299

Query: 289  SGNPLVIVEGIRQLLPQIQQTLPPGVYVALAYETARFIDASIHEVLRTLVEAMLIVVLVI 348
            + N L + + +   +  +++  P G+  A+ ++T  F+ ASI EV +TL EA ++V++VI
Sbjct: 300  AANALDVAKRVAAKMEDLKKNFPEGLDYAIPFDTTLFVTASIDEVWKTLFEAAILVLVVI 359

Query: 349  WLCLGSLRSVLIAVVAIPLSMLGAAGLMLMFGFSLNLLTLLAMVLAIGLVVDDAIVVVEN 408
             L L   R+ L+    +P++++GA   M   GF++NL TL A++LAIG+VVDDAIV+VE 
Sbjct: 360  LLFLQDWRATLVPATTVPVTIIGAFAAMDAMGFTINLSTLFAIILAIGIVVDDAIVIVEG 419

Query: 409  VHRHIEEGKSPIAAALAGAREIAGPVIAMTLTLAAVYAPIGLMGGLTGTLFREFALTLAG 468
            V RHIEEG +   AA     E+ GPV+ +TL L +V+ P   + GL+G +F++FAL +A 
Sbjct: 420  VARHIEEGMAGQPAAEKAMDELFGPVVGITLVLMSVFLPASFIPGLSGQMFKQFALVIAA 479

Query: 469  AVIVSGIVALTLSPVMSSLLLQ---PGQQHGAMAAIADRLFGTLSGVYGRVLAYTLAHRW 525
               +S I A TL P   +L L+   P ++   +    + ++G     Y  V++  + H  
Sbjct: 480  TAFISAINAATLKPTQCALWLRQPVPPEKRNFIYRGFNAIYGKAEHWYTGVISRMVHHSK 539

Query: 526  ISGGVAL-LVCLSLPWLYLLPQRELAPPEDQAAVLTAIKSPQHASLEYAERFALKLDQVM 584
            +   +A+ L+ ++   L  +P   L P EDQ   L  ++ P  ++L   ++    + + +
Sbjct: 540  LMVLIAIALMSVAGYGLTRIPTAFL-PIEDQGYFLAHVQLPDASNLNRTKKVMADVSERI 598

Query: 585  KSIAETTDTWIING-----TDGPAASFG--GINLSAWQARERSAAQ----VQAQLQQAVA 633
            + +        I+G          A+ G   I L+ W  R  +  Q    +   L +AVA
Sbjct: 599  RKVPGVQTVLAISGISVLDNSSTLANAGVTYITLTPWDVRYATKGQDLLSMYENLGKAVA 658

Query: 634  DIEGSSIFAFQVASLP--GSSGGLPVQMVLRSAQ-DYPELFQTMEVLKQRARDSGLFAVV 690
             +E + +      ++   G++ G  +Q  +R+   DY  L Q    +  + R     + V
Sbjct: 659  GVEEAEVVILVPPAIQGIGNAAGFTMQPQIRNGNFDYQLLEQITASMVDKGRAQSALSHV 718

Query: 691  DSDLDYNNPVVKVRVDRAKAASLGISMQAIGESLGVLVGEQYLNRFALFGRSYDVIPQSI 750
             S      P ++V V+R KA +LGI++  +  ++   +G  Y+N+   FG  + V  Q+ 
Sbjct: 719  SSSFRAGAPQIQVEVNRIKAETLGITVGQVFSTISAYLGSTYVNQINKFGNVFQVYIQAD 778

Query: 751  QDQRLTPAALSRQYVRA-EDGSLVPLATLVRLDIEVAPNRLLQFDQQNASTLQAIPAPGV 809
               R+TPA L +  VR+    +++PL T+V + + + P  +  ++   +ST+    A G 
Sbjct: 779  AGFRVTPADLMQLKVRSPTQNAMIPLGTVVDIKMTLGPPLISLYNLYPSSTIVGTNAAGF 838

Query: 810  SMGNAVAFLEQLTAE-LPPGFSHDWQSESRQYVQEGFALMWAFLAALVVIYLVLAAQYES 868
            S G A++ +EQ+ A  LPPG   +W + S Q    G  + + F  A++++Y VLA QYES
Sbjct: 839  SSGQALSLMEQIAASTLPPGTGFEWTAMSYQEKAVGNQIYYVFGLAILLVYFVLAGQYES 898

Query: 869  LVDPLIILVTVPLSICGALLP-LALGWATLNIYTQIGLVTLIGLISKHGILMVAFANEIQ 927
             + P+ +++ VPL++ G +   L LG A  N+YTQIGLV LI L SK+ IL+V +A E +
Sbjct: 899  WIQPMSVILAVPLALLGTVSALLGLGVAN-NLYTQIGLVLLIALASKNAILIVEYAREKR 957

Query: 928  VRDNLDRAAAIVRAAQIRLRPVLMTTAAMTFGVLPLLFASGAGANSRFGLGVVIVCGMLV 987
              + ++   A V A+++R RP+LMT+ A   GVLPL+FA+GAGANSR  +G+ +V GML 
Sbjct: 958  A-EGMEIMDAAVEASRLRFRPILMTSFAFILGVLPLVFATGAGANSRKSIGIAVVSGMLA 1016

Query: 988  GTLFTLFVLPTIYAWLAR 1005
             T   +  +P+ Y  L R
Sbjct: 1017 STCLAVLFVPSFYTVLQR 1034