Pairwise Alignments

Query, 1027 a.a., Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1042 a.a., The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  505 bits (1300), Expect = e-147
 Identities = 317/1037 (30%), Positives = 550/1037 (53%), Gaps = 36/1037 (3%)

Query: 15   LVVSSLIILMGLFAMGKLPIRQYPLLESSTITISTEYPGASAELMQGFVTQPITQAVSSV 74
            +V+S   +L+G      LP+  +P +    ++I  +Y GA++E++   VT P+ +A++ V
Sbjct: 1    MVISLFFVLLGALTFFSLPVALFPDIAPPAVSIRAKYRGANSEVVAKTVTTPLEKAINGV 60

Query: 75   EGIDYLSS-SSQQGRSLITLRMVLNRDSTQALAETMAKVNQVRYRLPEKAYDPVVELSAG 133
             G+ Y+SS SS +G S I +         +A  E   +V+ V   LP+      V +   
Sbjct: 61   PGMMYMSSVSSNRGTSKIKVYFGAETSPDEAAMEVQNRVSTVVNDLPQDVIKAGVTVEKE 120

Query: 134  DSTAVAYVGFASDSLSIPE--LSDYLSRVVEPQFSGIDGVAKVQSFGGQRLAMRLWLDSE 191
                + Y+       S+ E  + ++    V  +   +DGV   +    +  +MR+WL  +
Sbjct: 121  VEGLLLYINVMGSDPSMDEQFIYNFSDLNVLQELRRVDGVGFAEIMSTKDYSMRIWLKPD 180

Query: 192  QMAGRGVTAADVAQAVRANNYQATPGQVR------GQYVLADIQVDTDLTRVEDFRELII 245
            +M    V+  +V  A+   N +A PGQV        Q +   ++        +++  L+I
Sbjct: 181  RMTAYQVSTDEVKAALNNQNVEAAPGQVGVSSGKGAQMIQYGLRYSGKFNEAKEYENLVI 240

Query: 246  R-NDGTDLVRLRDIGTVELSAAATQTSATMDGKPAVHLGLFPTPSGNPLVIVEGIRQLLP 304
            R N    ++RL DI  VE  +      +  DGKPA  + +   P  N   +++ +++ + 
Sbjct: 241  RANKDGSILRLGDIADVEFGSLNYGRISKTDGKPAASIMIIQRPGSNARDVIQRVKKRME 300

Query: 305  QIQQ-TLPPGVYVALAYETARFIDASIHEVLRTLVEAMLIVVLVIWLCLGSLRSVLIAVV 363
            +++Q + PPGV   + Y+ +RF+DASIHEVL+TL+EA ++V LV+++ L   RS LI  +
Sbjct: 301  ELKQGSFPPGVDYKITYDVSRFLDASIHEVLKTLIEAFILVFLVVFIFLQDFRSTLIPAL 360

Query: 364  AIPLSMLGAAGLMLMFGFSLNLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGK-SPIAA 422
            A+P++++G    M +FGFS+N+LTL A+VLAIG+VVD+AIVVVE VH  +EE    P+ A
Sbjct: 361  AVPVALIGTLFFMQLFGFSINMLTLFALVLAIGIVVDNAIVVVEAVHAKMEEDHLPPMEA 420

Query: 423  ALAGAREIAGPVIAMTLTLAAVYAPIGLMGGLTGTLFREFALTLAGAVIVSGIVALTLSP 482
             LA  ++I G ++++TL ++AV+ P+  + G  G  +R+F++TLA A+++SGI ALTL+P
Sbjct: 421  TLAAMKDIGGAIVSITLVMSAVFIPVAFLDGPVGIFYRQFSITLAIAIVISGINALTLTP 480

Query: 483  VMSSLLLQPGQQHGAMAAIA-------DRLFGTLSGVYGRVLAYTLAHRWISGGVALLVC 535
             + +++L+          +        +R + + SG Y   L   +  R ++  V +LV 
Sbjct: 481  ALCAIILKNHYGTEQKKTLLNTFFNGFNRAYESFSGKYRNTLGVLVGRRLVT--VIMLVA 538

Query: 536  LSL-PW--LYLLPQRELAPPEDQAAVLTAIKSPQHASLEYAERFALKLDQVMKSIAETTD 592
              +  W    +LP     P EDQ+ V   + SP  A++E  E+    + Q  + + E   
Sbjct: 539  FFIGTWGVAKVLPS-GFIPVEDQSMVYINVVSPSGATVERTEKVLDHIQQAAEELDEVAA 597

Query: 593  TWII------NGTDGPAASFGGINLSAWQARERSAAQVQAQLQQAVADIEGSSIFAFQVA 646
               +       G  G +   G INL  W  RE S  +   +L    ADI  + +  F   
Sbjct: 598  VSTLAGYSLSTGLSGASYGMGMINLKNWDEREASIQETIDELYARTADISDAQVQFFLPP 657

Query: 647  SLP--GSSGGLPVQMVLRSAQ-DYPELFQTMEVLKQRARDSGLFAVVDSDLDYNNPVVKV 703
            ++   G+S G  ++++ ++   +  +L   +E   +   ++     V SD D N P   V
Sbjct: 658  TVSGFGNSSGFQMKVLDQTGSGNLQKLSLVIEDFVEALDNAPEIGEVKSDFDPNFPQYMV 717

Query: 704  RVDRAKAASLGISMQAIGESLGVLVGEQYLNRFALFGRSYDVIPQSIQDQRLTPAALSRQ 763
             VD+  AA  G+++     +L +L+G    + F  F   YDV+ Q+    R  P  + + 
Sbjct: 718  NVDQDMAAKKGVTISNAMSTLQILMGGVLASDFVRFENMYDVMMQAGPQYRANPEDVLKV 777

Query: 764  YVRAEDGSLVPLATLVRLDIEVAPNRLLQFDQQNASTLQAIPAPGVSMGNAVAFLEQLTA 823
            +V+ + G +VP+++ + L+    P +L + +   ++ ++ IPAPG S G+AVA ++++ A
Sbjct: 778  HVKNDGGEMVPISSFINLEKVYGPEQLSKHNMYTSAKVKGIPAPGYSSGDAVAAIQRVAA 837

Query: 824  E-LPPGFSHDWQSESRQYVQEGFALMWAFLAALVVIYLVLAAQYESLVDPLIILVTVPLS 882
            E LP G+ +DW   +RQ V  G   ++ F+  LV +YL+LAAQYES V PL +++ +P  
Sbjct: 838  EKLPKGYGYDWYGMTRQEVSSGNQAIYIFIICLVFVYLLLAAQYESFVLPLPVILFLPAG 897

Query: 883  ICGALLPLALGWATLNIYTQIGLVTLIGLISKHGILMVAFANEIQVRDNLDRAAAIVRAA 942
            + G+   L L     NIY Q+ L+ LIGL+ K+ IL++ FA  ++ ++ +D   A +  A
Sbjct: 898  VFGSFAALYLLGLQNNIYAQVALIMLIGLLGKNAILIIEFA-VLKRKEGMDIIPAAITGA 956

Query: 943  QIRLRPVLMTTAAMTFGVLPLLFASGAGANSRFGLGVVIVCGMLVGTLFTLFVLPTIYAW 1002
              RLRP+LMT+ A   G++PL  A+GAGA     +G   + GM  GT+F +F++P +Y  
Sbjct: 957  VSRLRPILMTSFAFMAGLVPLCMATGAGALGNRSIGTAALGGMFSGTVFGMFLIPGLYVL 1016

Query: 1003 LARDHRVSTARARQLVE 1019
             +   + +  + +  VE
Sbjct: 1017 FSSRRKKNKTKMKNKVE 1033