Pairwise Alignments

Query, 1027 a.a., Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1068 a.a., efflux RND transporter permease subunit from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  578 bits (1490), Expect = e-169
 Identities = 358/1052 (34%), Positives = 576/1052 (54%), Gaps = 35/1052 (3%)

Query: 4    TDVFVRRPVLALVVSSLIILMGLFAMGKLPIRQYPLLESSTITISTEYPGASAELMQGFV 63
            +DV VRRPV A V + ++ ++G  A   LP+R+ P ++   ++++T Y GASAE+++  +
Sbjct: 3    SDVSVRRPVFAAVAAIVLCVIGAAAFFFLPVRELPDVDPPIVSVNTSYAGASAEVIESRI 62

Query: 64   TQPITQAVSSVEGIDYLSSSSQQGRSLITLRMVLNRDSTQALAETMAKVNQVRYRLPEKA 123
            T+P+ Q ++ ++G++ ++S+S+ GRS + +   L+R+   A  +   +V++V  RLP++A
Sbjct: 63   TEPVEQQIAGIQGVERINSTSRDGRSNVNIEFSLDRNIDDAANDVRDRVSRVVGRLPDQA 122

Query: 124  YDPVVELSAGDSTAVAYVGFASDSLSIPELSDYLSRVVEPQFSGIDGVAKVQSFGGQRLA 183
              P V  +  DS  +  V   S S++  +L+DY  R +  + + + GVA+V  +G QR +
Sbjct: 123  DPPEVAKADSDSQPIIIVFLRSTSMNRLQLTDYADRYLIDRMATVPGVAQVNIYGEQRYS 182

Query: 184  MRLWLDSEQMAGRGVTAADVAQAVRANNYQATPGQVRGQYVLADIQVDTDLTRVEDFREL 243
            MR+WLDS  MA RG+T  DV  A+   N +   G +        ++V       EDFR+L
Sbjct: 183  MRIWLDSAAMAARGLTVNDVETALTNQNVELPAGSLESTDKDYTVRVARTYALPEDFRQL 242

Query: 244  ------------------------IIRNDGTDLVRLRDIGTVELSAAATQTSATMDGKPA 279
                                    II+   T + RL DI  VE +    +     +G   
Sbjct: 243  PIGTRGSASASATVATGTGSGSSAIIQGQPTYVTRLGDIARVEEAPEEDRRLFRGNGMDQ 302

Query: 280  VHLGLFPTPSGNPLVIVEGIRQLLPQIQQTLPPGVYVALAYETARFIDASIHEVLRTLVE 339
            + L +      N L I +G+ +++ +I+ TLPPGV + +  + + F   +I EV  T+  
Sbjct: 303  IGLAVTRQAQSNDLAISDGVHKMIEEIRPTLPPGVTIEVGSDNSVFTSHAIDEVWITIGI 362

Query: 340  AMLIVVLVIWLCLGSLRSVLIAVVAIPLSMLGAAGLMLMFGFSLNLLTLLAMVLAIGLVV 399
            +M +V LV ++ LGSLR+ LI  +  P+ +L    ++   GFSLNLLTLLA+VLAIGLVV
Sbjct: 363  SMALVALVNFIFLGSLRAALIPSIVAPICLLATFIVLAPLGFSLNLLTLLALVLAIGLVV 422

Query: 400  DDAIVVVENVHRHIEEGKSPIAAALAGAREIAGPVIAMTLTLAAVYAPIGLMGGLTGTLF 459
            DDAIVVVEN+ R ++ G+ P+ AA  GAR++   V+A T+ L +V+AP+  + G  G LF
Sbjct: 423  DDAIVVVENIQRRLDLGEPPLVAAERGARQVFFAVVATTIVLLSVFAPLLFLPGYVGRLF 482

Query: 460  REFALTLAGAVIVSGIVALTLSPVMSSLLLQPGQQHGAMAAIADRLFGTLSGVYGRVLAY 519
             E A  +A AV  S  +AL+LSP+++S +L+P    G +A   D     L   YGR L  
Sbjct: 483  VELAAAIAAAVAFSAFLALSLSPMLASKILRPAHGGGWVARKVDWGMDRLKSSYGRSLDM 542

Query: 520  TLAHRWI---SGGVALLVCLSLPWLYLLPQRELAPPEDQAAVLTAIKSPQHASLEYAERF 576
             L  R      G + LLV      ++L    EL P ED+  V   +  P+ A  +Y  + 
Sbjct: 543  LLGRRIAVIGVGALILLVAAGAGGIFLTLPNELVPDEDRGRVTVRVAGPEGAGFDYTRKI 602

Query: 577  ALKLDQVMKSIAET--TDTWIINGTDGPAASFGG----INLSAWQARERSAAQVQAQLQQ 630
             L L+ ++     +   D+++++       SF      + L+ W  R+RSAA++  +L  
Sbjct: 603  MLGLEPLLAEYKTSGEADSYLVSAPGFGGGSFNSGNAVLTLADWSKRDRSAAEIAQELNG 662

Query: 631  AVADIEGSSIFAFQVASLPGSSGGLPVQMVLRSAQDYPELFQTMEVLKQRARDSGLFAVV 690
             +    G+ + A    +     G      ++ +  DY +++  ++ +   A+ +  F+  
Sbjct: 663  KLRGQTGAQVNASTPGAFQRGGGNSNSIELIATGSDYQQIYAWLQPMLAAAQANPGFSRP 722

Query: 691  DSDLDYNNPVVKVRVDRAKAASLGISMQAIGESLGVLVGEQYLNRFALFGRSYDVIPQSI 750
              + + N+P + V VD  KAA+LG+S Q+IG +L  + G +    +   G+ YDVI Q+ 
Sbjct: 723  RLNYEPNSPRLLVDVDPQKAAALGVSSQSIGRTLETMFGSRRATTYIKGGQEYDVILQTE 782

Query: 751  QDQRLTPAALSRQYVRAEDGSLVPLATLVRLDIEVAPNRLLQFDQQNASTLQAIPAPGVS 810
            +D R   A L   YV    G LVPL+ +V            + D+Q A +LQA   PG +
Sbjct: 783  RDNRREVADLEALYVATGGGQLVPLSAVVTTKTSGDTPDRRRLDRQRAISLQADLNPGTT 842

Query: 811  MGNAVAFLEQLTAELPPG-FSHDWQSESRQYVQEGFALMWAFLAALVVIYLVLAAQYESL 869
            + +A+ FL    A+ P G     W   +R   + G A+  AF  AL++++LVLAAQ+ES 
Sbjct: 843  IDDAIQFLNAEAAKQPQGAVVTQWGGAARDQQEAGGAVFAAFGLALLLVFLVLAAQFESW 902

Query: 870  VDPLIILVTVPLSICGALLPLALGWATLNIYTQIGLVTLIGLISKHGILMVAFANEIQVR 929
            + P +I++TVPL+  G L  L +  ++LNIY+QIGL+ LIG+ +K+GIL+V FAN+++ +
Sbjct: 903  ITPAVIMLTVPLAAAGGLFGLLMAGSSLNIYSQIGLIILIGVAAKNGILIVEFANQLRDQ 962

Query: 930  DNLDRAAAIVRAAQIRLRPVLMTTAAMTFGVLPLLFASGAGANSRFGLGVVIVCGMLVGT 989
                R  AI+ ++ +RLRP++MT+ A  FG LPL+   GAGA SR  +GVVI  G +  T
Sbjct: 963  GRSIR-EAIIESSSLRLRPIIMTSIATAFGALPLVLWQGAGAGSRQTIGVVIFTGAIFAT 1021

Query: 990  LFTLFVLPTIYAWLARDHRVSTARARQLVEAE 1021
            + TLFV+P IY  LAR  +     AR++ E E
Sbjct: 1022 VLTLFVVPVIYGVLARFTKSPEWTARKIEEWE 1053