Pairwise Alignments

Query, 1027 a.a., Multidrug efflux RND transporter from Pseudomonas putida KT2440

Subject, 1042 a.a., Efflux pump membrane transporter BepE from Azospirillum sp. SherDot2

 Score =  730 bits (1884), Expect = 0.0
 Identities = 413/1012 (40%), Positives = 620/1012 (61%), Gaps = 8/1012 (0%)

Query: 1    MRFTDVFVRRPVLALVVSSLIILMGLFAMGKLPIRQYPLLESSTITISTEYPGASAELMQ 60
            M  +D+ +RRPVLA V+S  ++L+G+ +  +L +R+YP ++   +T+ T Y GASA++++
Sbjct: 1    MVLSDISIRRPVLATVMSLALMLIGIVSYQRLSVREYPKIDEPVVTVETTYKGASAQIIE 60

Query: 61   GFVTQPITQAVSSVEGIDYLSSSSQQGRSLITLRMVLNRDSTQALAETMAKVNQVRYRLP 120
              VTQ +  +++ +EGID +SS S+  +S ITLR  L+R+   A ++   +V +VR +LP
Sbjct: 61   SQVTQTLEDSLAGIEGIDVMSSISRAEKSQITLRFRLDRNVDVAASDVRDRVGRVRAQLP 120

Query: 121  EKAYDPVVELSAGDSTAVAYVGFASDSLSIPELSDYLSRVVEPQFSGIDGVAKVQSFGGQ 180
             +  +PV+     D+  + Y+ F+SD  S  E++D+  R V+ +   + GVA+V+ FG +
Sbjct: 121  SEIDEPVIAKVEADAQPIIYLAFSSDRHSPLEVTDFADRYVKDRLQNLPGVAQVRIFGER 180

Query: 181  RLAMRLWLDSEQMAGRGVTAADVAQAVRANNYQATPGQVRGQYVLADIQVDTDLTRVEDF 240
            R AMRLWLD ++MA   VT  DV  A+R  N +   G+V        +  +TDL    +F
Sbjct: 181  RFAMRLWLDPQRMAAYRVTPQDVENALRRQNVEIPAGRVESVAREFTVVSETDLRSPAEF 240

Query: 241  RELIIRNDGTDLVRLRDIGTVELSAAATQTSATMDGKPAVHLGLFPTPSGNPLVIVEGIR 300
              +I+R+D   LVRLRD+G  EL A   + SA  +G+ AV +G+    + NPL + + + 
Sbjct: 241  EAIILRDDSGYLVRLRDVGRAELGALDERVSARFNGRGAVAIGVVKQSTANPLDVSKAVN 300

Query: 301  QLLPQIQQTLPPGVYVALAYETARFIDASIHEVLRTLVEAMLIVVLVIWLCLGSLRSVLI 360
              LP+I+  +P G+ V + Y+++ FI  SI  V  T+ EA+++VVLVI+  L SLR+ L+
Sbjct: 301  DALPKIRAAVPDGMGVDVGYDSSVFIAKSIDAVFHTIFEAIILVVLVIFFFLRSLRATLV 360

Query: 361  AVVAIPLSMLGAAGLMLMFGFSLNLLTLLAMVLAIGLVVDDAIVVVENVHRHIEEGKSPI 420
             +V IP+S++G   LM   GFS+N LTLL+MVLAIGLVVDDAIV++EN+ R++EEG +P 
Sbjct: 361  PLVTIPVSLIGGFALMYALGFSINTLTLLSMVLAIGLVVDDAIVMLENIFRYVEEGMNPF 420

Query: 421  AAALAGAREIAGPVIAMTLTLAAVYAPIGLMGGLTGTLFREFALTLAGAVIVSGIVALTL 480
             AAL G+REI   VIAMT+TLAAVYAPIG M G TG LF EFALTLAGAVIVSG VALTL
Sbjct: 421  QAALKGSREIGFAVIAMTITLAAVYAPIGFMTGRTGRLFTEFALTLAGAVIVSGFVALTL 480

Query: 481  SPVMSSLLLQPGQQHGAMAAIADRLFGTLSGVYGRVLAYTLAHRWISGGVALLVCLSLPW 540
            SP+M S LL+   +HG +    +R    ++  Y R+L  +L  R +   + L V  +  +
Sbjct: 481  SPMMCSKLLKHETKHGLLYRAIERFLEGMTNGYRRLLRLSLRARPLVLLIGLGVAAASYF 540

Query: 541  LYLLPQRELAPPEDQAAVLTAIKSPQHASLEYAERFALKLDQVMKSIAETTDTWIINGTD 600
            L+   + EL+P ED+  ++    +P+ ++L+Y   +A +++ + + I      +++ G  
Sbjct: 541  LFTGLKSELSPVEDRGTIVGIAIAPEGSTLDYTMGYAQRMEALFRQIPVLEKFFVVVGFP 600

Query: 601  GPAASFGGINLSAWQARERSAAQVQAQLQQAVADIEGSSIFAFQVASLPGSSGGLPVQMV 660
                    + L  W  RE     + AQL   +  I G   F     SL  S    PV  V
Sbjct: 601  VVNQGIAFVRLIDWDEREVKQQAITAQLFPKMFGIPGILGFVTNPPSLGQSPIDKPVNFV 660

Query: 661  LRSAQDYPELFQTMEVLKQRARDSGLFAVVDSDLDYNNPVVKVRVDRAKAASLGISMQAI 720
            ++++  + EL   +  +   AR+      +D+DL  N P ++V +DR KAA LG+ +  +
Sbjct: 661  IQTSLPFEELQAMVNAMMAEARNFPGLTNLDTDLKLNKPELRVSLDRDKAADLGVDVDTV 720

Query: 721  GESLGVLVGEQYLNRFALFGRSYDVIPQSIQDQRLTPAALSRQYVRAED------GSLVP 774
            G +L  L+G + + RF   G+ YDVI Q     R  P  ++  YVR         G ++ 
Sbjct: 721  GRTLETLLGGRQVTRFKKDGKQYDVIVQVANVDRRNPDDIAGIYVRGGTSATGGAGQMIS 780

Query: 775  LATLVRLDIEVAPNRLLQFDQQNASTLQAIPAPGVSMGNAVAFLEQLTAE-LPPGFSHDW 833
            LA LV+++  VAP  L  F++  ++T+ A  APG S+G A+A ++    + LP     D+
Sbjct: 781  LANLVKVEERVAPKELNHFNKLRSATITATLAPGTSLGEALAVMQAAANKVLPATAQTDY 840

Query: 834  QSESRQYVQEGFALMWAFLAALVVIYLVLAAQYESLVDPLIILVTVPLSICGALLPLALG 893
              +SR++ +    L + F+ AL  IYLVLAAQ+ES VDP +I++TVPLS+ GAL  L + 
Sbjct: 841  AGQSREFRESATGLYFVFILALAFIYLVLAAQFESFVDPFVIMLTVPLSMTGALAALQMS 900

Query: 894  WATLNIYTQIGLVTLIGLISKHGILMVAFANEIQVRDNLDRAAAIVRAAQIRLRPVLMTT 953
              T+N+Y+QIGLVTL+GLI+KHGIL+V FAN++Q R   D   A+  AA +RLRP+LMTT
Sbjct: 901  GGTMNVYSQIGLVTLVGLITKHGILIVEFANQLQ-RAGTDIRKAVEEAAVLRLRPILMTT 959

Query: 954  AAMTFGVLPLLFASGAGANSRFGLGVVIVCGMLVGTLFTLFVLPTIYAWLAR 1005
             AM  G +PL +A GAGA SR  +G VIV GM +GTL TLFV+PT+Y++LAR
Sbjct: 960  GAMVLGAVPLAYAKGAGAESRQAIGAVIVGGMTLGTLLTLFVVPTVYSYLAR 1011