Pairwise Alignments

Query, 365 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 435 a.a., multidrug efflux transport system - putative membrane fusion protein from Pseudomonas putida KT2440

 Score =  102 bits (255), Expect = 1e-26
 Identities = 92/329 (27%), Positives = 150/329 (45%), Gaps = 38/329 (11%)

Query: 57  ASGELEAVNQVQVAAEMPGRITRIAFESGQTVAAGQLLVQLNDAP-------EQALRVQL 109
           A G + A N V V + + G + +I F+ GQ V AG LL +++  P        +    Q 
Sbjct: 83  ALGTVTATNTVNVRSRVAGELVKIHFKEGQRVKAGDLLAEIDPRPYRIALQQAEGTLAQN 142

Query: 110 QARLRNADVVLQRSRKLRAMNAVSQELLDNAATAVDVARGELQHVEALIAQKA------- 162
           QA+L+NA V L R + L A ++++++ LD A   V   +G ++  +A +           
Sbjct: 143 QAQLKNAQVDLARYKGLYAEDSIAKQTLDTAEAQVAQFQGLVKTNQAQVNDARLNLDFTQ 202

Query: 163 IRAPFAGKLGIRRVHQGQYLAAGET--IVSLADISQLHVNFALGEQAAPEVHAGQVL--- 217
           IRAP +G++G+R++  G  +AA +T  +V +     ++V F L     PE     VL   
Sbjct: 203 IRAPISGRVGLRQLDLGNLVAANDTTALVVITQTEPINVAFTL-----PETELSTVLERY 257

Query: 218 ----ALTVDAVRGQDFQARVVAV-----DPVVSTARLVQVQAALPNPQGQLQPGMYAGVR 268
               +L V+A    D + +   V     + + +T   ++ +    N    L P  +  VR
Sbjct: 258 RSGASLPVEAWDRGDSKLQSTGVLGSIDNQIDTTTGTLKFKGRFENKDLALFPNQFVNVR 317

Query: 269 LDAAQPSTVLAVPETAITYTAYGQTVFVATQDPQHGTRVSRVQVTTGERWQGRVEITSGL 328
           L A     V+  P  AI +   G   +V  +      R  +V  + GE       I  GL
Sbjct: 318 LLADTLKQVVMAPAAAIQFGNDGTFAYVVNEQSTVNVRKLKVGASDGE----NSVILDGL 373

Query: 329 TPGDRVVVSGQLKLSDGMPVEPVAQDSLQ 357
             GDR+V+ G  +L +G  VE V +DS Q
Sbjct: 374 KAGDRLVLEGTDRLREGTKVE-VVEDSSQ 401