Pairwise Alignments

Query, 365 a.a., Multidrug efflux RND membrane fusion protein from Pseudomonas putida KT2440

Subject, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

 Score =  127 bits (319), Expect = 5e-34
 Identities = 118/378 (31%), Positives = 169/378 (44%), Gaps = 42/378 (11%)

Query: 15  GALAAAYALVGSGSAPP----AAAVWPATKVALATAEQVQLARQRFASGELEAVNQVQVA 70
           GALA A AL G   A      A A +P   V LA  EQV LA +    G +E +   +V 
Sbjct: 11  GALAMAIALAGCEPAAEQDGAANASYPVEIVTLAP-EQVALAAE--LPGRVEPMRVAEVR 67

Query: 71  AEMPGRITRIAFESGQTVAAGQLLVQLNDAPEQALRVQLQARLRNADVVLQ-------RS 123
           A +PG +    FE G  V AG +L Q++ AP +A   + +A L  A  V Q       R 
Sbjct: 68  ARVPGIVLHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQAVQQEAQARVKRY 127

Query: 124 RKLRAMNAVSQELLD-------NAATAVDVARGELQHVEALIAQKAIRAPFAGKLGIRRV 176
             L  + AVSQ+  D       +A  AV  A+ ++Q     +    + AP +G++G    
Sbjct: 128 EPLVKIEAVSQQDFDSATAELRSAGAAVRSAQADVQAARLNLGYATVTAPISGRIGRALA 187

Query: 177 HQGQYLAAGET--IVSLADISQLHVNFALGEQAAPEVHAGQVL---ALTVDA------VR 225
            +G  +  GE   +  +  +  ++++F   + AA  +   Q L   AL+ D+      V 
Sbjct: 188 TEGALVGQGEATLMARIQQLDPIYIDFT--QSAADALRLRQALKDGALSADSQRLTAQVE 245

Query: 226 GQDFQARVVAVDPVVSTAR---LVQVQAALPNPQGQLQPGMYAGVRLDAAQPSTVLAVPE 282
           G DFQ     +   VS  R    V ++    N  G L PGMY  VR      +  + VP+
Sbjct: 246 GTDFQRSGELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRVRTPQGTDNHAILVPQ 305

Query: 283 TAITYTAYGQTVFVATQDPQHGTRVSRVQVTTGERWQGRVEITSGLTPGDRVVVSGQLKL 342
            A+   + GQ   +   +     R  R  V  G RWQ    IT GL PGD+V+V     L
Sbjct: 306 RAVQRGSDGQARVLVATNGIAEARAVRTGVMQGSRWQ----ITEGLEPGDQVIVGSPAGL 361

Query: 343 SDGMPVEPVAQDSLQASQ 360
           + GMPV P AQ    A+Q
Sbjct: 362 APGMPVAP-AQKQTAAAQ 378