Pairwise Alignments

Query, 359 a.a., putative isomerase from Pseudomonas putida KT2440

Subject, 371 a.a., 3-methylitaconate isomerase from Xanthobacter sp. DMC5

 Score =  221 bits (564), Expect = 2e-62
 Identities = 140/361 (38%), Positives = 196/361 (54%), Gaps = 18/361 (4%)

Query: 9   MRGGTSKGPFFHAWDLPANVVERDELLINLMGSG--HELEIDGIGGGSPQTSKVAIISPS 66
           MRGGTSK   FHA DLP +    DEL    MGS   +  ++DG+GGG    SKV ++ PS
Sbjct: 1   MRGGTSKALMFHARDLPPDRTTWDELFAAAMGSPDPYGRQLDGMGGGLSSLSKVCVVGPS 60

Query: 67  LHADADVDYLFVQVMVAQRRVDTAPNCGNMLCAVGPFAIEQGLV-KGQEGKTLVRIRNLN 125
              DADVDY F QV +   RVD + NCGNM  AVGPFA+++ +V   ++G+  VRI N N
Sbjct: 61  QRPDADVDYTFAQVAIGAPRVDYSGNCGNMTSAVGPFAVDERMVAPPEDGEARVRIFNTN 120

Query: 126 TGTFVNSLVETPGGIVRYEGRTAIDGVPGTAAPVHLTFLDAVGSKTGKLFPTGKAQDVID 185
           T   +++      G  R++G  AI GV GT AP+ L F+D  G+ TG+L PTG  +DV+D
Sbjct: 121 TSKLIHATFPVEDGCARFDGDLAIPGVSGTGAPIRLDFIDPGGASTGRLLPTGAVRDVLD 180

Query: 186 -----GVPVTCIDMAMPMMVVEASQLGVSGSETPAQLDANSALLERLEALRLKAGKAMGL 240
                 + V+ +D A   + V A  +G++G E P +LD  + +L RL+A+R  A  AMG+
Sbjct: 181 VPGLGRLEVSMLDAANAAVFVRAEDVGLTGHEAPQELDTRADILARLDAIRCAASVAMGI 240

Query: 241 G-DVSGM----VIPKPVLVSKPR--YDGTLQVRYFMPHNCHRALAITGAVGLATACVSPG 293
             D+       VIP    V+      DG   +R       HRAL +T ++  A A    G
Sbjct: 241 APDIEAARRIPVIPFICFVASAEGDTDGDFVIRAISNGQPHRALPLTISLCAAAAAQMDG 300

Query: 294 TVIADLLGEGAQQLAQVRLEHPSG--GIDVALTRSGAEGQTIQASVVRTARRLFSGFVYA 351
           +V+A+      +    +RL  P+G   +D  + R+    Q    S  RTARRLF G V+ 
Sbjct: 301 SVVAE-CRRPERSAGPIRLVMPAGVLTVDADVVRTPDGWQVRSGSFYRTARRLFDGRVWI 359

Query: 352 P 352
           P
Sbjct: 360 P 360