Pairwise Alignments

Query, 359 a.a., putative isomerase from Pseudomonas putida KT2440

Subject, 396 a.a., 3-methylitaconate isomerase from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 9e-49
 Identities = 133/387 (34%), Positives = 184/387 (47%), Gaps = 39/387 (10%)

Query: 3   RIPCVLMRGGTSKGPFFHAWDLPANV----VERDELLINLMGSG--HELEIDGIGGGSPQ 56
           +IP   MRGGTSKG FF   DLP +       RD LL+ ++GS   ++ +IDG+GG +  
Sbjct: 8   KIPATYMRGGTSKGVFFSLQDLPESAQVPGAARDALLLRVIGSPDPYDKQIDGMGGATSS 67

Query: 57  TSKVAIISPSLHADADVDYLFVQVMVAQRRVDTAPNCGNMLCAVGPFAIEQGLVK----G 112
           TSK  I++ S  AD DVDYLF QV + +  VD + NCGN+  AVG FAI  GLV      
Sbjct: 68  TSKTVILAKSTRADHDVDYLFGQVSIDKPFVDWSGNCGNLSAAVGSFAISAGLVDPARVP 127

Query: 113 QEGKTLVRIRNLNTGTFVNSLVETPGGIVRYEGRTAIDGVPGTAAPVHLTFLDAVGSKT- 171
             G  +VR+   N G  + + V    G V+  G   +DGV   AA V L F+D    +  
Sbjct: 128 HNGVAVVRVWQANIGKTIIAHVPITDGAVQETGDFELDGVTFPAAEVQLEFMDPAAEEEG 187

Query: 172 --GKLFPTGKAQDVID--GV---PVTCIDMAMPMMVVEASQLGVSGSETPAQLDANSALL 224
             G +FPTG   D ++  GV     T I+  +P + + A  LG +G+E    ++++   L
Sbjct: 188 GGGSMFPTGNLIDDLEVPGVGTFKATLINAGIPTIFINAEDLGYTGTELQGAINSDPKAL 247

Query: 225 ERLEALRLKAGKAMGL-----GDVSGMVIPKPVLVSKP------------RYDGTLQVRY 267
              E +R      MGL             PK   V+KP              D  L VR 
Sbjct: 248 AMFETVRAYGALRMGLIKHLDEAAQRQHTPKVAFVAKPADYVASSGKAINAGDVDLLVRA 307

Query: 268 FMPHNCHRALAITGAVGLATACVSPGTVIADLLGEGAQQLAQVRLEHPSGGIDVALTRSG 327
                 H A+  T AV + TA    GT++   L  G  +   VR  HPSG + V    + 
Sbjct: 308 LSMGKLHHAMMGTAAVAIGTAAAISGTLVN--LAAGGVERNAVRFGHPSGTLRVGAEATQ 365

Query: 328 AEGQTI--QASVVRTARRLFSGFVYAP 352
             G+ +  +A + R+AR L  GFV  P
Sbjct: 366 VNGEWVVKKAIMSRSARVLMEGFVRVP 392