Pairwise Alignments

Query, 359 a.a., putative isomerase from Pseudomonas putida KT2440

Subject, 396 a.a., 2-methylaconitate isomerase from Variovorax sp. SCN45

 Score =  189 bits (481), Expect = 8e-53
 Identities = 142/388 (36%), Positives = 191/388 (49%), Gaps = 41/388 (10%)

Query: 3   RIPCVLMRGGTSKGPFFHAWDLPANV----VERDELLINLMGSG--HELEIDGIGGGSPQ 56
           +IP   MRGGTSKG FF   DLP         RD LL+ ++GS   +  +IDG+G  +  
Sbjct: 8   KIPATYMRGGTSKGVFFRLQDLPEAARVPGKARDALLLRVIGSPDPYGKQIDGMGAATSS 67

Query: 57  TSKVAIISPSLHADADVDYLFVQVMVAQRRVDTAPNCGNMLCAVGPFAIEQGLVKG---- 112
           TSK  I+S S     DVDYLF QV + Q  VD + NCGN+  AVGPFAI  GLV      
Sbjct: 68  TSKTVILSKSERPGHDVDYLFGQVSIDQPFVDWSGNCGNLSAAVGPFAISNGLVDAGRVP 127

Query: 113 QEGKTLVRIRNLNTGTFVNSLVETPGGIVRYEGRTAIDGVPGTAAPVHLTFLDAVGSKT- 171
           ++G  +VRI   N G  + + V   GG V+  G   +DGV   AA V L F+D    +  
Sbjct: 128 RDGVAVVRIWQANIGKTIVAHVPMTGGAVQETGDFELDGVTFAAAEVQLEFMDPAAEEEG 187

Query: 172 --GKLFPTGKAQDVIDGVP------VTCIDMAMPMMVVEASQLGVSGSETPAQLDANSAL 223
             G +FPTG+  D ++ VP       T I+  +P + V A  +G +G+E    ++ + A 
Sbjct: 188 AGGAMFPTGQLVDELE-VPGVGTLRATMINAGIPTIFVNAEAIGYTGTELQDAINGDPAA 246

Query: 224 LERLEALRLKAGKAMGL----GDVSG-MVIPKPVLVSKP------------RYDGTLQVR 266
           L R EA+R      MGL    G+ +G    PK   V+KP              D  L VR
Sbjct: 247 LARFEAIRAHGAVRMGLIKHIGEAAGRQHTPKVAFVAKPAGYTASSGKQVAAGDVDLLVR 306

Query: 267 YFMPHNCHRALAITGAVGLATACVSPGTVIADLLGEGAQQLAQVRLEHPSGGIDVALTRS 326
                  H A+  T AV + TA   PGT++   L  G  +   VR  HPSG + V    S
Sbjct: 307 ALSMGKLHHAMMGTAAVAIGTAAAIPGTLVN--LAAGGGEREAVRFGHPSGTLRVGAQAS 364

Query: 327 GAEG--QTIQASVVRTARRLFSGFVYAP 352
             +G  Q  +A + R+AR L  G+V  P
Sbjct: 365 KVDGEWQVTRAVMSRSARVLMEGWVRIP 392