Pairwise Alignments

Query, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

Subject, 296 a.a., DNA-binding transcriptional activator of 3-phenylpropionic acid catabolism (NCBI) from Escherichia coli BW25113

 Score =  124 bits (311), Expect = 3e-33
 Identities = 83/292 (28%), Positives = 149/292 (51%), Gaps = 5/292 (1%)

Query: 4   ELQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLTSVG 63
           EL+ +R FV +A+  +F  AAE LH SQP+LS +I+ LE  +G  LL R  R+V+LT+ G
Sbjct: 2   ELRHLRYFVAVAQALNFTRAAEKLHTSQPSLSSQIRDLENCVGVPLLVRDKRKVALTAAG 61

Query: 64  RDFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYPKIR 123
             FL  A  +L+  E++ L  R++ + +  Q+T+  +P+A    LP V+  +  + P   
Sbjct: 62  ECFLQDALAILEQAENAKLRARKIVQ-EDRQLTIGFVPSAEVNLLPKVLPMFRLRQPDTL 120

Query: 124 IRLLDLSANDGLEAVLRGEADFGINMMSGQHPDIEFVSLVQEHFVLACRRDHPLANRASV 183
           I L+ L      E + RGE D G+       P+I+++ L  E  V+    DHPLA+   +
Sbjct: 121 IELVSLITTQQEEKIRRGELDVGLMRHPVYSPEIDYLELFDEPLVVVLPVDHPLAHEKEI 180

Query: 184 TWTELADYRLIGVGRLSGNRM--LLDHALSGLNLRPKWFYEVQHLSTSLGMVEAGLGVSA 241
           T  +L     +    +    +  ++    +  N +P       ++  ++ +V  GLGV+ 
Sbjct: 181 TAAQLDGVNFVSTDPVYSGSLAPIVKAWFAQENSQPNIVQVATNILVTMNLVGMGLGVTL 240

Query: 242 MPSLAMPNADHPTLVSVPLIEPQVTRTLGLVYRRGASLSPAAEKFVSILLQK 293
           +P   M N +   +V  P+     +  L + +++G  + PA   F++I+ ++
Sbjct: 241 IPGY-MNNFNTGQVVFRPIAGNVPSIALLMAWKKG-EMKPALRDFIAIVQER 290