Pairwise Alignments

Query, 297 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

Subject, 305 a.a., DNA-binding transcriptional regulator OxyR from Dickeya dadantii 3937

 Score =  127 bits (318), Expect = 4e-34
 Identities = 88/279 (31%), Positives = 137/279 (49%), Gaps = 7/279 (2%)

Query: 5   LQDIRSFVKIAELGSFHEAAEALHLSQPALSRRIKKLEEGLGTSLLERTTRRVSLTSVGR 64
           ++D+   V +AE   F  AA++ H+SQP LS +I+KLE+ LG  LLERT+R+V  T  G 
Sbjct: 3   IRDLEYLVALAEHRHFRRAADSCHVSQPTLSGQIRKLEDELGVMLLERTSRKVLFTQAGL 62

Query: 65  DFLPKARRLLDDFEDSILSIRELAERQTGQVTLACIPTAAFYFLPSVIRDYNEQYPKIRI 124
             + +AR +L + +       +  E  +G + +  IPT   Y LP +I   +  +PK+ +
Sbjct: 63  LLVEQARTVLREVKVLKEMASQQGETMSGPLHIGLIPTVGPYLLPQIIPMLHRTFPKLEM 122

Query: 125 RLLDLSANDGLEAVLRGEADFGINMMSGQHPDIEFVSLVQEHFVLACRRDHPLANRASVT 184
            L +   +  L  +  G+ D  I  M  +      V L  E   LA  +DHP ANR  V 
Sbjct: 123 YLHEAQTHQLLAQLDSGKLDCAILAMVKESEAFIEVPLFDEPMKLAIYQDHPWANRERVA 182

Query: 185 WTELADYRLIGVGRLSGNRMLLDHALS---GLNLRPKWFYEVQHLSTSLGMVEAGLGVSA 241
            ++L+  +L+    L     L D A+             +    L T   MV AG G++ 
Sbjct: 183 MSDLSGEKLL---MLEDGHCLRDQAMGFCFQAGADEDTHFRATSLETLRNMVAAGSGITL 239

Query: 242 MPSLAM-PNADHPTLVSVPLIEPQVTRTLGLVYRRGASL 279
           +PSLA+ P      +  +P  +P+  RT+ LVYR G+ L
Sbjct: 240 LPSLAVPPERVRDGVCYLPCYKPEPKRTIALVYRPGSPL 278