Pairwise Alignments

Query, 394 a.a., 3-ketoacyl-CoA thiolase (thiolase I) from Pseudomonas putida KT2440

Subject, 398 a.a., 3-ketoacyl-CoA thiolase [fadN-fadA-fadE operon] (EC 2.3.1.16) from Variovorax sp. SCN45

 Score =  276 bits (705), Expect = 1e-78
 Identities = 171/403 (42%), Positives = 235/403 (58%), Gaps = 21/403 (5%)

Query: 1   MKDAVIVATARTPIGKAMRGAFNDLKTPSMTAVAIRAAVERA-GIEPAQVDDLVLGTAMQ 59
           ++DA IV+  RTPIGK+ RG F + +   + A  +RAA+     ++P  ++D++ G A+ 
Sbjct: 4   VQDAYIVSATRTPIGKSHRGYFRNYRPDDLLATTLRAALAAVPSLDPKAIEDIICGCAIP 63

Query: 60  SGTAAINPGRLSALAAGLPQSVSGQTVDRQCASGLMAIATAAKQIMVDGMQVTIGAGQEQ 119
                +N  R+ A+ AGLP SV G TV+R CASGL A+  AA +I V    V I AG E 
Sbjct: 64  ESQQGLNVARIGAVLAGLPTSVGGITVNRFCASGLSAVQMAADRIRVGEADVMIAAGVES 123

Query: 120 ISLVQQVHNQLASEAYDPAVLRMSEHAYMP--MLQTAERVARRYGISREAQDVYALQSQQ 177
           +S+V  + N   S +  P++        +   M  TAE+VA+++ +SREAQD +AL S Q
Sbjct: 124 MSMVPMMGN---SPSLSPSIFEREGDVGIAYGMGLTAEKVAQQWKVSREAQDEFALASHQ 180

Query: 178 RTAAAQAAGLFAAEIVPVIARKKVVDKLTGVVSHEEVRLTQ----DEGNRPATTLADLQG 233
           +  AAQ AG FA EI P+    +V D+   + + E +  T+    DEG RP T+L  L  
Sbjct: 181 KALAAQKAGKFADEITPI----EVTDRTPNLETGESIAKTRTVNLDEGARPDTSLEGLAK 236

Query: 234 LKPVVEG-GCVTAGNASQLSDGASACVLMEGALAARSGIAALGLYRGIAVAGLAPEEMGI 292
           L+ V    G VTAGN+SQ SDGA A +L       + G+  L  +   A  G+ P  MGI
Sbjct: 237 LRTVFAARGTVTAGNSSQTSDGAGALILASEKAVKQYGLTPLARFVSFASKGVPPHIMGI 296

Query: 293 GPVLAVPKLLRQQGLTVDDIGLWELNEAFACQVLYCAQQLQIDPAKLNVNGGAIAIGHPY 352
           GP+ A+P  LR  GL  +DI  +ELNEAFA Q L     L +DP+K+N  GGAIA+GHP 
Sbjct: 297 GPIEAIPAALRYAGLKHEDIDWFELNEAFAAQSLAVINTLGLDPSKVNPMGGAIALGHPL 356

Query: 353 GMSGA---RMVGHALLEGKRRKVKYVVVTMCVGGGMGAAGLFE 392
           G +GA     V HAL   +R  +KY +VTMCVG G GAAG+FE
Sbjct: 357 GATGAIRSATVVHAL---RRENLKYGMVTMCVGMGQGAAGIFE 396