Pairwise Alignments

Query, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 598 a.a., Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) from Variovorax sp. SCN45

 Score =  516 bits (1330), Expect = e-151
 Identities = 282/601 (46%), Positives = 379/601 (63%), Gaps = 24/601 (3%)

Query: 3   YQAPLRDMRFVLHELFDLSGHCQQLGI--ELDRDTLDGILEEAARFTGQIIAPLNRNSDE 60
           Y  P+RDM+FVLHE+ +++   + L    E D DT++ ++EEA +F  ++  PLN + DE
Sbjct: 4   YNPPVRDMQFVLHEVLNVTEELKALPAHAETDADTINAVIEEAGKFAAEVTFPLNISGDE 63

Query: 61  QGCQW--VGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAAS 118
           +GC       EV TP G +DAY +YVE GW +++   A+GGQGLP + +    EML +A+
Sbjct: 64  EGCTLDKATHEVKTPKGFKDAYAKYVEGGWPALSCDPAFGGQGLPFVVNQCLFEMLNSAN 123

Query: 119 LSFRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRA 178
            ++ +Y GL+ GA  AL  HG+E  K+ YL ++ SGEW GTMCLTEP  GTDL LLRT+A
Sbjct: 124 QAWTMYPGLSHGAYEALAAHGTEEQKKTYLPKLTSGEWTGTMCLTEPHCGTDLGLLRTKA 183

Query: 179 QPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPG--- 235
           +P+ADG+YRITGSKIFIS GE D+TDNI+HLVLARLPDAP G +GISLF+VPK       
Sbjct: 184 EPQADGTYRITGSKIFISAGEHDMTDNIIHLVLARLPDAPKGSKGISLFVVPKFKVKADG 243

Query: 236 --GERNALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGL 293
             GERN + C  LEHKMGI G +T  +  +GA G LVGE N+GLA MF MMN AR  VG 
Sbjct: 244 SLGERNPIFCAGLEHKMGIHGNATAQIVIEGATGTLVGEPNKGLAAMFVMMNAARLGVGN 303

Query: 294 QGLGIAEAAFQGGLAYARERLQSRSLAGPVAAEKPADPIIVHPDVRRMLLTQKTLTEGCR 353
           Q LG+ E A+Q  LAYA++R+Q RSL+G  A +K ADPIIVHPDVR+MLLT K   EG R
Sbjct: 304 QSLGLTEVAYQNALAYAKDRIQMRSLSGVKAKDKEADPIIVHPDVRKMLLTAKAYAEGGR 363

Query: 354 MLGIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGY 413
            L I+    LD EH       R+ +    ALL PIVKAF TD G    +  +QV+GGHG+
Sbjct: 364 ALQIFCTLLLDKEHNHPDEKVRKDSGELVALLTPIVKAFITDNGHISTNACMQVFGGHGF 423

Query: 414 IREWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAEL-------NLLIDEMAPH 466
           I+EWGMEQ +RD+RI  +YEGTN IQ+LDL+ RKVLG+ GA L         L++E   +
Sbjct: 424 IKEWGMEQFVRDNRINMIYEGTNTIQSLDLLGRKVLGNNGASLKKFGKLVGKLVEEEGVN 483

Query: 467 VRAANALGGLQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAA 526
            + A  +  +     G+G +L ++    G       ++P E GA +VD+L  + + +   
Sbjct: 484 EKMAEFINPI----AGLGDQLTKFTTEIGF---KGFQNPDEVGAAAVDYLRVAGHFVFGY 536

Query: 527 MWLQAAVRAQATLATGSAETAFYRAKLDAATFYWRRILPRATAHREALLGGADCLMALPA 586
           ++ + A  A   +A G+ +  FY AKL  A FY+ ++ P           G+  LM   A
Sbjct: 537 LFARMAQVALREIAAGNND-PFYVAKLQTARFYFAKLFPETATLMRTARAGSKVLMDTDA 595

Query: 587 S 587
           +
Sbjct: 596 A 596