Pairwise Alignments

Query, 591 a.a., putative acyl-CoA dehydrogenase from Pseudomonas putida KT2440

Subject, 581 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase (DmdC) from Variovorax sp. SCN45

 Score =  475 bits (1222), Expect = e-138
 Identities = 261/555 (47%), Positives = 341/555 (61%), Gaps = 12/555 (2%)

Query: 1   MNYQAPLRDMRFVLHELFDLSGHCQQLG--IELDRDTLDGILEEAARFTGQIIAPLNRNS 58
           M+YQ    D+RF+L+ + D       L    E+D      +LEEA RF G++IAPLNR  
Sbjct: 1   MDYQPRPEDVRFLLNAVLDAPTRLAALAPFAEVDEALQSQVLEEAGRFVGEVIAPLNRGG 60

Query: 59  DEQGCQWVGGEVTTPDGMRDAYRQYVEHGWASMTGPQAYGGQGLPQMASASFHEMLMAAS 118
           DE GC++ GGEV +P G R+AY+ +V+ GW +++     GGQGLP +  A  +E L AA+
Sbjct: 61  DETGCRFAGGEVASPPGFREAYQAFVDGGWPALSAAPEDGGQGLPAVLEAVLYEWLAAAN 120

Query: 119 LSFRIYSGLTEGAVLALHRHGSEPLKQAYLSRMVSGEWAGTMCLTEPQAGTDLALLRTRA 178
             F +  GL  GA   L  HGS+ LKQ YLS++ +GEW  TMCLTE  AG+DL  +RTRA
Sbjct: 121 HGFTMAPGLLHGAYACLKHHGSDELKQRYLSKIATGEWLATMCLTEAHAGSDLGQVRTRA 180

Query: 179 QPEADGSYRITGSKIFISGGEQDLTDNIVHLVLARLPDAPAGVRGISLFLVPKLLPGGER 238
            P+ADGS R++G KIFISGGE DLT NIVHLVL RLPDAP G +G+SL LVPKLLP G R
Sbjct: 181 VPQADGSVRVSGGKIFISGGEHDLTPNIVHLVLCRLPDAPDGPKGLSLALVPKLLPDGAR 240

Query: 239 NALGCGALEHKMGIKGASTCVMNFDGAQGWLVGEANQGLACMFTMMNDARFQVGLQGLGI 298
           NA+ C  +E KMG+ G+ TC M FD A GWLVGE  +GLA MF MMN AR  V LQG+G+
Sbjct: 241 NAVHCERIEEKMGLHGSPTCTMRFDDATGWLVGEPGRGLAAMFVMMNSARLHVALQGIGL 300

Query: 299 AEAAFQGGLAYARERLQSRSLAGPVAAEK---PADPIIVHPDVRRMLLTQKTLTEGCRML 355
            +AA+Q   AYA ER Q R+  GPV A +    AD I  HP VRR+L TQ+   +G R L
Sbjct: 301 LDAAWQKADAYAAERRQMRA-PGPVPASRGGESADLIAEHPAVRRILDTQRAWIDGARAL 359

Query: 356 GIYTARQLDLEHAAKSAPARQAAARRAALLIPIVKAFFTDVGQEVASLGVQVYGGHGYIR 415
              +A  LD+      A AR+ A R  + + P++KA  T      AS  +QV+GGHGY+R
Sbjct: 360 AYRSALMLDVAAHDADAKARERAQRWCSFVTPVLKAACTQQAFHGASECLQVFGGHGYVR 419

Query: 416 EWGMEQLMRDSRITQLYEGTNGIQALDLIRRKVLGDGGAELNLLIDEMAPHVRAANALGG 475
           EWG+EQ++RDSR+T +YEGTN IQA+DL+ RKVL DGGA ++ ++ E+       + L  
Sbjct: 420 EWGIEQIVRDSRVTMIYEGTNEIQAIDLLVRKVLPDGGAGMSAVLLEL------RDTLDA 473

Query: 476 LQAMATGVGQRLEEWRALSGHVVEACERDPQESGAVSVDFLAYSAYVLLAAMWLQAAVRA 535
            +     V +RL + R L   V  A   +P     V+ D+L  +   +LA  W +    A
Sbjct: 474 SREADADVQRRLAQLRYLGTTVAMAAHANPALPYEVADDYLRVAMLTMLAWAWARIEAAA 533

Query: 536 QATLATGSAETAFYR 550
               A      AF R
Sbjct: 534 PRDAARARVAAAFRR 548